Ruegeria pomeroyi: SPO3246
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Entry
SPO3246 CDS
T00215
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
sil
Ruegeria pomeroyi
Pathway
sil02024
Quorum sensing
sil03060
Protein export
sil03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SPO3246 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SPO3246 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SPO3246 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sil02044
]
SPO3246 (ffh)
Enzymes [BR:
sil01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
SPO3246 (ffh)
Secretion system [BR:
sil02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SPO3246 (ffh)
Eukaryotic Sec-SRP protein
SPO3246 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
YqeC
AAA_31
AAA_22
AAA_33
ResIII
Motif
Other DBs
NCBI-ProteinID:
AAV96481
UniProt:
Q5LNF9
LinkDB
All DBs
Position
3449526..3451058
Genome browser
AA seq
510 aa
AA seq
DB search
MFENLSERLSGVFDRLTKQGALSEEDVKTALREVRVALLEADVSLPVARDFVKAVQDKAT
GQAVTKSVTPGQQVVKIVHDTLVDVLRGAEDPGKLKIDNPPAPILMVGLQGGGKTTTTAK
LAKRLKEREGKKVLMASLDVYRPAAMDQLAVLGAQIGVDTLPIVPGQKPVDIAKRAKQQA
MMGGYDVYMLDTAGRLHIDQVLMQEVEDVRNVVTPRETLLVVDGLTGQVAVEVAEEFDAK
IGISGVVLTRMDGDGRGGAALSMRAVTGKPIRFVGLGEKMDALETFEPERIAGRILGMGD
IVALVEKAQETIEMEQAERMMKRMAKGQFNMNDLKMQLEQMIQMGGMQGMMGMLPGMGKM
AKQMDAAGLDDRVLKQQIALIQSMTKKERANPALLQASRKKRIAAGSGMEVSDLNKLLKM
HRQMADMMKKMGKMGKGGMLKQAMKGMFGKGGTPADMAEMAKGMDPKALEAAAKAMGGGK
GLGGGLPGGLPGLGGGMGLPPGLSGLGKKK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaaatctgtccgaacgcctctctggcgtcttcgaccgcctgaccaagcagggc
gcgctgagcgaggaagacgtcaagaccgccctgcgcgaggtgcgcgtcgcgctgctcgag
gcggacgtgtcgctgccggtggcacgtgacttcgtcaaggcggtgcaggacaaggccaca
ggccaggcggtgaccaagtcggtcacgccgggccagcaggtcgtcaagatcgtccatgac
acgctggtcgacgtgctgcgtggcgccgaagacccgggcaagctgaagatcgacaacccg
cccgcgccgatcctgatggtcggcctgcagggtggcggcaagaccacaaccaccgccaag
ctcgccaagcgcctgaaagagcgcgaaggcaagaaggtgctgatggcctcgctcgacgtc
tatcgcccggcggcgatggaccagctggcggtgctgggcgcgcagatcggcgtcgacacc
ctgccgatcgtgccgggccagaagccggtggatatcgccaagcgcgccaagcaacaggcg
atgatgggcggctatgacgtctacatgctcgacaccgccggccgcctgcatatcgatcag
gtgctgatgcaagaggtcgaggatgtccgcaacgtcgtaaccccgcgcgaaaccctgctg
gtggtcgatggcctgaccggccaggtcgccgtcgaggtggccgaggaattcgatgccaag
atcggcatctcgggcgtggtcctgacccggatggacggcgacgggcgcggcggcgccgcc
ctgtcgatgcgtgcggtgaccggcaagccgatccgctttgtgggcttgggcgaaaagatg
gacgctctcgaaacattcgagcccgaacgtatcgccggccgcatcctgggcatgggcgat
atcgttgccctggtcgaaaaggcccaggaaaccatcgagatggaacaggccgagcgcatg
atgaagcgcatggccaagggtcagttcaacatgaacgacctcaagatgcagctggaacag
atgatccagatgggcggcatgcagggcatgatgggcatgctgccgggcatgggcaagatg
gccaagcagatggatgccgcgggtctggacgaccgtgtcctgaaacagcagatcgcgctg
atccagtcgatgaccaagaaggaacgcgccaatcccgccctgctccaggccagccgcaag
aagcgaatcgccgccggctccgggatggaggtcagcgacctcaacaagcttctgaaaatg
catcgccagatggcggacatgatgaagaagatgggcaagatgggtaagggcggcatgctg
aaacaggccatgaagggcatgttcggcaagggtggcacacccgccgacatggccgagatg
gccaagggcatggaccccaaggcgctcgaggctgcggccaaggcgatgggcggcggcaag
ggtcttggcggcggtctgccaggtggcctgcccggcctgggtggcggcatgggcctgccc
ccggggctgagcgggctgggaaagaagaagtaa
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