Sphingopyxis indica: KNJ79_17275
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Entry
KNJ79_17275 CDS
T09492
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sina
Sphingopyxis indica
Pathway
sina03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sina00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KNJ79_17275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sina03400
]
KNJ79_17275
DNA repair and recombination proteins [BR:
sina03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KNJ79_17275
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WOF42883
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All DBs
Position
3677262..3678119
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AA seq
285 aa
AA seq
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MAARAYWKGQIRLALVSIPVEIYPATRSGASVSFRQIHEPSGKPVKYEKIVPGIGPIDKD
DIVKGYELSKGNYVLLDEEEIEAVKLESKRTLELVQFVEASDIDILYYEKPYYVVPADEL
AEEAYIVLREALRRTKKVGLGQLALRGQEQLVGLRPCGRGLVLEMLRYADEVNKAASYFR
DIPASKPDADLLDLAETLIDRKTGKFDASDFHNHYVDAIKRVIAKKAKAKGKRVLEDVEE
PADIREGSNVIDLMAALKASVDGKKKTATASKKAPAKKAPAKKRA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcgcctattggaagggacagatccgcctcgccctggtgtcgatcccggtc
gaaatctatcccgcgaccagatcgggcgcgagcgtcagctttcgccagatccacgaaccg
agcggcaagccggtcaaatatgagaaaatcgtccccggcatcggtccgatcgacaaggac
gacatcgtcaagggctatgagctgtcaaagggcaattatgtcctgctcgacgaggaggag
atcgaggcggtcaagctcgagagcaagcgcacgctcgaactcgtccagttcgtcgaggcg
agcgacatcgacatcctctattatgaaaagccctattatgtcgtccccgccgacgagctc
gccgaagaggcctatatcgtgctacgcgaggcgctccgccgcacgaaaaaggtcgggctc
ggccagctcgcgctgcgcgggcaggaacagctcgtcggtctgcgcccgtgcggcaggggc
ctcgtcctcgaaatgctgcgctatgccgacgaggtgaacaaggcggcgagctatttccgc
gacatccccgcctcgaaacccgacgccgacctcctcgacctcgccgaaacgctgatcgac
aggaagaccggcaagttcgacgcgagcgattttcacaaccattatgtcgacgcgatcaag
cgcgtgatcgccaaaaaggcgaaggcaaagggcaagcgcgtgctcgaggatgtcgaggag
cccgccgacattcgcgagggctcgaacgtcatcgacctgatggccgcgctcaaggcgtcg
gtcgacggcaagaaaaagaccgcgaccgcgtcgaagaaggcgccggcgaaaaaggcgccg
gccaaaaagcgggcatag
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