Sphingobium indicum B90A: SIDU_05215
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Entry
SIDU_05215 CDS
T04604
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03089
RNA polymerase sigma-32 factor
Organism
sinb
Sphingobium indicum B90A
Brite
KEGG Orthology (KO) [BR:
sinb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sinb03021
]
SIDU_05215
Transcription machinery [BR:
sinb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SIDU_05215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ARA70
HTH_11
Motif
Other DBs
NCBI-ProteinID:
APL93953
UniProt:
I5BET5
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All DBs
Position
complement(1101990..1102904)
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AA seq
304 aa
AA seq
DB search
MADKSNVPAVPALGGEASLNRYLSEIRKFPILTPEQEYMLAKRYAEHQDSEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEFI
LRSWSLVKMGTTAAQKKLFFNLRRMKNNIEAFEDGDLHPDDVKKIATDLGVTEEDVISMN
RRMAMGGDTSLNVPMREDGEGQWQDWLADSDPLQDERVADRQESELRHDMLVEAMDDLND
REKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGDRLGKISR
LAAV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagcaatgtccccgcggttccggcgctgggcggtgaagccagcctcaac
cgctatctgtcggaaatccgcaaatttccgattttgacgcccgagcaggaatatatgctc
gcgaagcgctatgccgaacatcaggattcggaagctgcggcgcagctcgtgacctcgcac
ctgcgactggtcgcgaagatcgccatgggctatcgcggctatggcctgccggtcagcgag
ctgatcagcgaaggcaatatcgggctgatgcagggcgtcaagaagttcgagccggatcgc
ggcttccgtctggcgacctatgcgatgtggtggattcgcgcctctatccaggaattcatc
ctgcggtcctggagccttgtgaagatgggcaccaccgccgcgcagaaaaagctgttcttc
aacctgcgccggatgaagaacaatatcgaagccttcgaggatggcgacctgcaccccgac
gacgtcaagaagatcgccaccgatctgggcgtcacggaggaggacgtgatctccatgaac
cgccgcatggcgatgggcggcgacacgtcgctcaacgtgccgatgcgcgaggatggcgag
ggccagtggcaggattggctggccgatagcgatccattgcaggacgaacgcgtcgccgac
cggcaggaaagcgaactgcgccacgacatgctggtggaggcgatggacgacctcaacgat
cgcgagaagcatatcctggcggaacgccgcctggcagaagaacccaagacgctggaggaa
ctctcgcaggtctatggcgtcagccgcgaacgcgtccgtcagatcgaggtccgcgccttc
gagaagctgcaaaaggcgatgatgcggattgcgggcgacaggctgggcaagatttcccgc
ctcgccgccgtctga
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