KEGG   Sesamum indicum (sesame): 105158855
Entry
105158855         CDS       T04135                                 
Name
(RefSeq) splicing factor U2af small subunit B
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105158855
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105158855
Spliceosome [BR:sind03041]
 Complex A
  U2 snRNP components
   U2 related factors
    105158855
 Complex B
    105158855
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 105158855
NCBI-ProteinID: XP_011074052
UniProt: A0A6I9STW5
LinkDB
Position
LG3:19489083..19491584
AA seq 283 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPAISPTLLLSNMYQRPDMITP
GVDAQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIETLNVCDNLADHMIGNVYVQFKEED
QAAAALNALQGRFYSGRPIIADFSPVTDFREATCRQYEENSCNRGGYCNFMHVKMIGREL
RRKLFGRHHGRFWGKRSRSRSASPPQHYHRRERERERERDHERRDYRGGGRRSGGDRYGG
RYESERRRHGGSPRRSRSPVREGSEERRARIEQWNREREEKGQ
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcctccatattcgggaccgagaaagaccgtgtcaattgccctttt
tacttcaagatcggcgcctgccgtcacggagaccgctgctctcgcctccacaaccgtccc
gccatttccccgacgctgctgctctcgaatatgtaccagcggcccgacatgatcacccca
ggcgttgacgcccagggacaacccattgacccccgcaagatccaggaacatttcgaggat
ttctacgaggacatctttgaggagctcagcaaatttggggagatcgagaccctcaacgtc
tgcgacaacctagccgaccacatgattgggaatgtctatgtccagttcaaggaggaggat
caggctgccgctgctttgaacgccttgcaggggaggttttactctggccgtcccattatt
gccgacttttcgcctgtcaccgattttcgcgaggccacctgcaggcaatacgaggagaat
agttgtaatcgtgggggctattgcaattttatgcatgtcaaaatgatcggtagggaactg
aggaggaagctgtttggcaggcaccatggcaggttttgggggaagcggagccgcagcagg
agtgcgagtccaccgcagcattaccataggcgagagagggagagggagcgggagagggat
catgagaggcgggattatcgtggtgggggaaggaggagtggaggtgatagatatggagga
aggtatgagagtgagaggagaaggcatggaggtagtccaaggaggagcaggagtccagtg
agggaagggagcgaggagcgcagagctaggattgagcagtggaatcgggagagggaggag
aaggggcagtga

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