Sesamum indicum (sesame): 105170619
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Entry
105170619 CDS
T04135
Name
(RefSeq) nuclear pore complex protein NUP214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105170619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105170619
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105170619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
105170619
NCBI-ProteinID:
XP_011089759
UniProt:
A0A6I9U799
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Position
LG9:complement(4545142..4564828)
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AA seq
1758 aa
AA seq
DB search
MANPPLLDLTTDGAPLFELDDEIDGDEVGSRNYRFCKVGEPVPIKSDDSSEFDPQCLPSQ
PLAVSERFRLLFVAHPQGFCVARTKDVMASAEEIKEKQTGPSVQELSLVDVSIGKVSILA
LSSDDSLLAVTIGNHVHFFAVSALLHKDQKPSYSVSLDDSICIKDMRWARKVAKAYVILS
DDGKLYHGSGQGPPSYVMEGVDSVDWSVKGNFVAVAKKNIVSILSSEFEEKLRFLLQFQS
VVGDSDVNQVIKVDSIRWIRPDCLAVGCFQLNDDGEEENYIVQVITTRGRKITDVSAAAK
PIVLSFNNVFMDFSSDAVPIRNGPHLFLSYLDLYGLAFIANRNLSQHVGLFCWSLDSGKN
EAAVIEILNDAWNLYIDTQVNGEENVIMGLSVDKVSQNENVRFTLGDEETEVSPCCLIVC
QTIDGKISVFHFASARGALASSEVCADEEEDDSQASTNHQLSVISSAGGEESRVPTSLPS
ESHEFSRVAIGKTGAKATITNELSPSFHLDGRSQEQTYTENTGQKPLTNSQMVKVKVDEP
EKALSTKQNQDSNPEYQSISEVKRSTGFFTAEVVGDSFQQSMSNYSISGRNVEPLGKVPP
TSSPSGWSLTRSNARVDSSKPSTGKFLSFPSGEIGNSDKPALQSGGGVERRATDLKEKAK
PSVSFTSFGQTDSSAQGNRNSLPGSPGSQASLTESVASGKSFPSEFKKELSAAPSPAGFP
YSAQKVSKQFGNVEEMARKLDKLLEGIEGKGGFRDASITSQTHSVVELEDCIWALSDRCR
TWRGLMDERSKEVQLLLDKTIQVLVRKVYMEGIFKQATDSRYWELWNRQKLSSEMELKRR
RILELNQELTTKLIELERHFNSLEFNKFGEDGGMPRNRRVLQNSHRHSRQIQPLHILHNT
THAQLAAAEQLSGCLSKQMAALSIESSGKHDMKKQLFESIGLSYVGDTMTSPTRTRTSST
PSDQKHFIASGYIASKQQSRRNQASSAKSYEPETARRRRDSLDRTWANFDPPKTTVKRML
KEDSEKGSANRSLFNMDKQYLSPQLQKKSEVAHSALLNLSGGVNHYQSRGTAEIPVKEST
QSPSSSLPQRTAGLLGRGMQVSSTKQISALPPPSILETRTTQSSEVGVFKLIDEKSKSSL
PFTGKNDSFAPNESKLVQRFDTSFHPLPSMSGQMPEHSLTPPSSSTESLDHFKIGFTKSN
TLNPKSTSMASDTTLFDSKIPITPASSFSSGSNVSVKGLFTKNSEKTSQPYDGLSVSTQL
QSVSSNSLPSLSAFVSKPSSLTLSPVTPSSSGASVAAKEVPQPQTSVPSTVNFPSMLSLS
THENNLSSISPSSSIKNPESLTSLSVPSIAKYGSETEGVLQTRTSVAHVPSKVEEDVKIQ
ASASQPGLAITASDLKFGPLPSTAPSELSINSKSGSKIDFGDSSKSSSVTSAIKLELPSA
TEALSPVALSSEGIGDSAKNVVSESSHEEMEEEAPETDQTAGFALGNFVGFGIGSTSDST
APKSKPFGVAVLNKSTTSAPSQYMAPASGGELFRPASFNFQSPQPPEPLQPPNVANFSGG
SGIPGQVSAGAGFGQPAHVGVGQQALGSVLGTFGQSRQLGAGLPGSGVASASGFGSGFVG
TPAGGFGVGFASASSGGGFGSLASGAGGFAAAATVGGGFAAAATAGGGFAGAASAGGGFA
AAASAGGGFGAAASAGGGFGAAASAGGGFGSSTTSGAVSGGGFGAFSNQQGSGGGFSAFA
GGSGVGRPPSELFTQMRK
NT seq
5277 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatcctccgctacttgacctcacaactgatggcgctcccctcttcgaattggac
gacgagattgacggagacgaagtcggttccagaaattaccgcttctgtaaagttggagag
cccgttcctatcaagtcggatgacagctccgagttcgacccccaatgcctcccctcccaa
cccttggccgtatccgaacgctttcgtctcctctttgtagctcatccccaggggttttgt
gttgcgaggacaaaggacgtgatggcatcggccgaggaaattaaggagaaacaaaccggc
ccatctgtacaggagttaagtctcgtggatgtctccataggaaaggtctcaatactggca
ctgtcgtctgacgattccttgctcgctgtcactattggcaaccatgtccatttctttgct
gttagcgctctgctccataaggaccaaaagccttcctattcggtctcactagatgattcc
atttgcatcaaggatatgcgctgggctagaaaagttgcaaaagcttatgttattctttca
gatgatggaaagttataccatgggtctggtcaaggtccccctagctatgtgatggaaggc
gttgattctgtcgactggagtgttaaaggcaattttgttgctgtggcaaaaaagaacatc
gtcagcattttgtcatcagaatttgaggaaaaattaagatttttgctacaattccagtca
gtggttggtgattctgatgtcaaccaagtaataaaagtggattccatccgatggatccgt
ccagattgtctagctgttggatgcttccaattaaatgacgacggagaggaggaaaattac
atagtccaagtcatcactaccaggggcagaaagattactgatgtcagtgcagctgcaaag
ccgattgtcttatccttcaataatgtcttcatggatttttcttctgatgctgtgcccatc
agaaatggaccacatctgtttctcagctatctagatctttatgggctggcatttattgcc
aataggaatctctcccagcatgttggactgttctgttggtcactggacagtgggaagaat
gaagctgcagtgattgaaattcttaatgatgcttggaatttgtatatcgatactcaagtt
aatggtgaagaaaatgtaatcatgggactctctgttgacaaggtttcccagaatgaaaat
gtcagattcacactgggggatgaagaaaccgaagtctcaccgtgttgtttaattgtatgc
caaaccattgatggaaagatttcagttttccactttgccagtgctcgaggggctttagca
tcatctgaagtttgtgctgatgaagaagaggatgattcccaggcatcaacgaaccatcaa
ctctccgtgatttcttctgcaggtggtgaggaaagtagagtgccaacctctttgccatct
gaatctcatgaatttagtagagttgctattggaaagacaggtgctaaggccactatcaca
aatgaattatcgccatcttttcatttagatggcagatcacaagaacaaacttacactgaa
aacacggggcagaagcctcttacaaactctcagatggtgaaagtcaaagttgatgagcca
gaaaaagccctttccacaaagcagaaccaagatagtaatccagagtatcaatcaatatct
gaagtcaaacgcagtacaggtttcttcacagcagaagttgtcggtgattcttttcagcaa
tcaatgagcaactattcaatatcaggtcggaatgtggagccattaggtaaagttccacca
acaagttcaccaagtgggtggtctttaaccagatcaaatgcaagagttgattcgtcaaaa
ccttctactgggaagtttttgtcattcccatctggtgaaattggcaattcagacaaacct
gcactacaatctggtggaggtgtagaacgacgtgctacagatctaaaggagaaagctaaa
ccttctgtttcttttacttcttttgggcagacagattccagcgcacagggcaatagaaat
tcactgccaggaagtcctggttcacaagcatctttgacggagagtgttgcttctggaaaa
tctttcccgtctgaattcaaaaaggagttgagtgcggctccctcaccagcaggattccca
tactctgctcaaaaagtgtcaaaacaatttggaaatgttgaagaaatggccagaaaatta
gataagcttcttgaaggtattgaaggtaagggtggctttagggatgcatccataacttct
caaacacactcggtggtagagttggaggattgcatatgggctctttcagacagatgcaga
acatggagggggctaatggacgaacgatcaaaggaagtccaacttctgcttgataaaacg
atacaagttttggttaggaaagtgtatatggaagggatcttcaagcaagcgacagatagc
cgatattgggaactttggaatcgtcaaaaattgagttctgagatggaattgaagcgaaga
cgtatattggaattaaaccaggagttgacaactaagttgattgaactggagaggcatttc
aattcattggagttcaataaattcggtgaagatggaggaatgccaagaaaccggagagtt
ttgcagaattcgcacaggcattcaaggcaaattcagcccttgcatattctacataacacg
acgcatgcgcaattggcagctgctgagcaactttctggatgtctctcgaagcagatggct
gctttgagtatcgaatcttctgggaagcatgatatgaaaaagcagctctttgaatccatt
ggtctttcttatgttggtgacactatgacatctccaactaggaccagaacttccagtact
ccttcagaccaaaaacatttcatcgcttcaggctatattgctagtaaacaacagtctaga
agaaaccaagctagctctgccaagagctatgaaccagaaactgcaaggcggcgccgagac
tctctggatcgcacttgggctaactttgaccctccaaaaacaactgtgaaaaggatgctg
aaagaagattctgagaaaggaagtgcaaatcgttcactgtttaacatggataaacaatat
ctcagtcctcagttgcagaagaaatcagaagttgctcattcagcacttttgaacctctct
ggaggggtgaaccattatcaaagcagaggcactgctgaaataccagtaaaagagtcgact
cagagcccatcatcatctttgccccaaaggacagctggtcttctaggtcgtggaatgcaa
gtgtcatctacaaaacagatttcagcattgccaccaccatccatattggagacaaggaca
actcaaagtagtgaagtaggagtattcaaacttattgatgaaaaatctaagagcagccta
ccttttaccggaaagaatgattcttttgctccaaatgagtcgaaacttgttcaacggttc
gatacaagctttcatccattaccatccatgtctgggcagatgcctgagcactcactgaca
ccaccctctagttcaactgagagcttagatcactttaaaattggatttaccaagtcaaac
accttgaatccgaagagtactagtatggcatctgatacaacattatttgactccaaaatt
ccgataactcctgcatcttctttcagttctggctcaaatgtatcagtgaaaggtttattc
actaaaaattcggaaaagacaagccagccttatgatggcctgtctgtctctacccagttg
caatcagtttcaagtaacagtttaccatcactttcagcttttgtatcaaaaccaagttca
ttaaccctgtccccggtgactccttccagttctggggccagtgtagctgcaaaggaggta
ccacagcctcagacatcagttccttcaaccgtaaattttccttctatgttgtcattgtct
actcatgagaataatctttcatctatatccccatcttcaagcattaaaaatcccgagtct
ctcacatcattgtctgttccatctattgcgaaatatggctcagagacagagggcgtcttg
cagacacggacttcagttgctcacgttccatcaaaagttgaagaggatgtcaagattcag
gcttcagcatcacagcctgggttggcaattactgcatctgatttgaaatttggacctttg
ccctcaactgcaccatctgaattgtctattaattcgaaatctgggagtaaaattgatttt
ggtgactcatcaaagagttcatccgttacatcagctattaagttagaattgccttctgcg
actgaagctctttcaccagttgcactatcaagtgaagggattggtgacagtgcaaaaaat
gtcgtttcagaatcatctcatgaggaaatggaggaggaagcccctgagacagatcagaca
gctggatttgcattagggaactttgttgggtttgggattggttcaacctcagattcaaca
gctccaaagtcaaaaccatttggtgtagcagtcctcaacaaaagtacaacttccgctccc
tctcaatatatggctcctgcttctggcggtgagctgtttcgacctgcgtcttttaacttt
caatcaccccagcctccagaacctttgcagccaccaaatgtcgctaacttttctgggggt
tctggaatacctggtcaagtttcagcaggggctggatttggccagccagcacatgtagga
gtaggccaacaagcactaggctcagtactcggtacctttggacagtctaggcaacttggg
gctggtctgccaggaagcggtgttgcatctgcaagtggctttggcagtggttttgtgggc
actcctgctggtggttttggagttggttttgcttctgcttcttccggtggtggatttggt
agtctggcatcaggcgctggtggttttgctgctgcagcaacagttgggggtggattcgct
gctgcagcaactgctggtggtggatttgcaggtgctgctagtgctgggggtggatttgcc
gccgctgctagtgcaggaggtggatttggtgccgctgctagtgctggaggtggatttggt
gccgctgctagtgctggaggtggatttggctcttcaacaacatccggtgctgtttcaggt
ggcggatttggagcttttagcaatcagcagggtagtggtggtgggttctctgcctttgct
ggtggatcaggagttggaaggccaccctctgaactcttcacgcagatgaggaaatag
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