Sinomicrobium kalidii: LS482_21270
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Entry
LS482_21270 CDS
T07760
Name
(GenBank) DUF4982 domain-containing protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
sinh
Sinomicrobium kalidii
Pathway
sinh00052
Galactose metabolism
sinh00511
Other glycan degradation
sinh00600
Sphingolipid metabolism
sinh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sinh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
LS482_21270
09103 Lipid metabolism
00600 Sphingolipid metabolism
LS482_21270
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
LS482_21270
Enzymes [BR:
sinh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
LS482_21270
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro2_C5
Glyco_hydro_2_C
Glyco_hydro_2_N
DUF4982
Glyco_hydro_2
Invasin_D3
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
UGU16195
LinkDB
All DBs
Position
complement(5270876..5273350)
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AA seq
824 aa
AA seq
DB search
MDTKYFLYLSVWVIAIGMASCSPDLPREDIKRRQLFTKDWSFQLQDTVKKDTLTGNWKLL
NLPHDWSIEGKFNEKHPATFSGGALPGGIGYYKKTFDLPSEYAGKQVYIQFDGVYMNSEV
YLNGKLLGKRPNGYIGFEYDLTPYLNFEATNTMTVKVDNSQQPNSRWYSGSGIYRNVWLT
VTDKVHVKNRGTYVTTPEVSKDRSEVHAEVEVVNNHAEDREGVVKTSVLFNGKKISEKEQ
TVRFKTGDTRLVTADHTVEKPELWSVETPDLYTLKTDIYIDNQLTDSHKTPFGIRSFEFD
PDKGFILNGEHLKIKGVCMHHDLGALGTAINTRALERQLEILRGMGVNGIRTAHNPPAPE
LLELCDKMGFIVMDEMFDMWEKGKSEYDYSLYWDEWHERDLVDFIKRDRNHPSVFMWSIG
NEIPEQWGERGAEIGRKLSKIVKSLDTTRPVTAGMNPPIHTNDNDVTLQFDEPAQPNALA
GSGALDLIGYNYAHQTYTQHQINFPETPFIATETTSALATRGYYDQRSDSIKRWPYRWDQ
LFLDGNPGNTVSAYDQVSAPWGSTHEETWKVIKKHDFMSGMFIWTGFDYLGEPTPYVWPS
RSSYFGVIDLAGFPKDAYYMYKSEWTDETVLHIFPHWNWEPGREVDIWAYYNNADEVELY
LNDRSLGKRSKKDDDLHVMWRVPFEPGTLKAVSRKEGKEVLVKEIKTAGKPAQIKLEADR
KTISADGKDLSFVTVSIVDVEGNIAPTATNRIDFELSGPGKIAGVDNGDPTSHESFKAKN
KKAFYGKCLVIIQSSGTNGEIRLTAKGDGLNAGTLTINCRQVPR
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggacacgaaatattttttatacctatcagtatgggttattgccataggcatggcatcc
tgtagccctgatctgccccgggaagatataaaacgcaggcaattgttcaccaaagactgg
agttttcagcttcaggatacggttaaaaaagataccctgaccggcaactggaaacttctg
aaccttccccacgactggagcatagaaggaaaattcaatgaaaaacacccggccaccttt
agcggcggagcactgcccggagggatcggttattataaaaagaccttcgaccttccttcg
gaatatgccggcaaacaggtgtacatacagttcgacggcgtttatatgaacagtgaagta
tacctcaacggtaaactactgggaaaacgccccaacggttatatcggttttgaatatgat
ctgaccccttacctcaatttcgaggcgaccaacaccatgaccgtaaaggtcgataattcg
caacagcccaattcccgctggtactccggttcggggatctaccgcaatgtatggcttacc
gtaacagacaaggtacacgtaaagaaccggggaacctacgtgaccactccggaagtaagc
aaagaccggtctgaagtccatgcagaagtggaagtggtgaacaaccatgccgaagaccgg
gaaggagtggttaagacctccgtacttttcaatggtaaaaaaatatcggagaaagagcaa
acggtcaggttcaaaaccggcgatactcgtttggtcacagccgatcacaccgttgagaaa
ccggaactctggtcggtagagacacccgatctctacaccctgaaaaccgatatctatatc
gataaccagctcacggacagtcacaaaaccccgttcggtatccgctctttcgaatttgat
ccagacaaagggttcatcctgaatggtgaacacctcaagatcaaaggggtttgcatgcat
cacgacctgggggccttaggaacggccatcaataccagggcgctcgaaagacagctggaa
atactccgtggaatgggggtcaacgggatcaggacagcccacaacccgcccgccccggaa
ctgctggagctctgtgataaaatgggctttatcgtcatggatgaaatgtttgacatgtgg
gaaaaagggaaatccgaatacgactacagcctgtactgggacgaatggcacgaacgggac
ctggtggatttcattaagcgtgaccggaaccaccccagtgtttttatgtggagcatcggt
aatgaaattcccgaacaatggggagagcgtggcgccgaaatagggcggaaactgtcaaag
atcgtcaaaagtctggatactacccgtccggtaaccgcgggaatgaatcctcccatccac
accaatgacaatgatgttactttacagtttgatgagcctgcccaacccaatgccctggca
gggtcgggagcgctggatcttatcggttacaattatgcccatcaaacctatacgcagcat
cagataaatttcccggaaacaccgtttatcgccaccgaaacaacttcggcactggctaca
aggggctattacgatcaacggtccgattccattaaaagatggccatatcgctgggaccag
cttttccttgacggtaacccgggcaataccgtttcggcttacgaccaggtgagtgccccg
tggggttcaactcacgaagaaacctggaaagtcattaaaaaacacgattttatgtcgggc
atgttcatctggacagggttcgattatctgggcgaacctactccttacgtatggccgtcc
aggagctcctatttcggggtgatcgatctggccggttttcccaaggatgcgtattatatg
tacaaaagtgagtggactgacgaaaccgtacttcacatattcccgcactggaactgggag
cccggaagggaagtcgatatctgggcatattataacaatgccgatgaagtggagctgtac
ctgaatgacaggtcactgggaaaacggtctaaaaaagacgatgacctgcatgttatgtgg
cgtgttccctttgagcccggaacattgaaagctgtttcaagaaaagaagggaaggaagtg
ctggtgaaagaaatcaaaaccgccggtaaacctgcccaaataaaactggaggccgacaga
aagaccatatcggcagacgggaaagacctttcttttgtcactgtttccatagttgatgtc
gaggggaatattgcccctaccgcgaccaataggattgattttgaactgtccggtccaggt
aaaatagcaggagtggacaatggcgaccctaccagtcacgaatcctttaaggccaaaaat
aaaaaggctttttacggaaaatgcctggtaattatacagtcgtccggaacaaatggagaa
atacggttaacggccaaaggagacggtttaaacgcaggtacgttaactataaactgccgg
caggtcccgagataa
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