Streptococcus iniae ISET0901: DQ08_03495
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Entry
DQ08_03495 CDS
T03285
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
siq
Streptococcus iniae ISET0901
Pathway
siq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
siq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DQ08_03495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
siq03400
]
DQ08_03495
DNA repair and recombination proteins [BR:
siq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DQ08_03495
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
DQ08_03495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
T2SSE
AAA_5
AAA_7
AAA_16
Microtub_bd
UB2H
AAA_22
AAA
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHY15539
UniProt:
A0A3L8GI72
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All DBs
Position
702373..704364
Genome browser
AA seq
663 aa
AA seq
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MIDKQENRAFKLVSKYQPSGDQPQAIAELVDNIEGGEKSQILLGATGTGKTYTMSQVISK
VNKPTLVIAHNKTLAGQLYGEFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGSPKEYADSAVSLRPGQEISRDTLLNQ
LVDIQFERNDIDFQRGRFRVRGDVVEVFPASRDEHAFRVEFFGDEIDRIREIESLTGKVL
GQVDHLVLFPATHFVTNDEHMEASIAKIQAELDEQLQLFESEGKLLEAQRLKQRTEYDIE
MLREMGYTNGVENYSRHMDGRSEGEPPYTLLDFFPEDFLIMIDESHMTMGQIKGMYNGDQ
ARKKMLVDYGFRLPSALDNRPLRREEFESHVHQIVYVSATPGDYEMEQTDTIIEQIIRPT
GLLDPIVEVRPTMGQMDDLLGEINLRSEKGERVFITTLTKKMAEDLTDYLKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLIGINLLREGIDVPEVSLVAILDADKEGFLRNTRGLI
QTIGRAARNAEGRVIMYADKMTDSMKAAIDETARRRQTQMAYNEAHGIVPQTIKKEIRDL
ITITKAKDTDSLEEAADFSAMNASERKEAVKKLQKQMHEAAEMLDFELAAEIRDMILELK
TMN
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgattgataaacaagagaacagagcatttaaactcgtttcaaaataccaaccgtcagga
gatcaaccccaagcgattgcagaattagttgataacattgaaggtggagagaagtcacaa
attttattaggggcaactggtacagggaaaacatataccatgagtcaagttattagtaag
gttaacaagccaactctggttattgcccataataaaaccttagcgggacaactctatgga
gaatttaaagaatttttcccagataatgctgttgaatactttgtttcttactatgattat
taccaacccgaagcttatgtgccatctagcgacacctatattgaaaaagacagttcagtg
aatgatgaaattgataaattgcgacattccgcaacatcgtcacttttagagcgtaatgat
gtcattgtcgttgcttctgtttcttgtatttatggtttgggctctccaaaggaatacgca
gattctgcagttagtttaagacctggtcaagagatatcgcgtgacaccttattgaaccaa
ttggttgacattcaattcgaacgtaatgatattgattttcagcgtggccgttttcgtgtg
cgaggcgatgttgtagaagtttttccagcctcaagagacgagcatgcttttagggttgaa
ttctttggggatgaaatcgatcgtatcagagaaattgaaagtctcacagggaaggtttta
gggcaagttgaccatttggttctgtttcctgctactcactttgtcactaatgatgagcat
atggaagcttcaattgcaaaaatccaagcagaacttgatgagcaacttcaattatttgaa
tcagaaggtaaactcttagaagcgcagcgattaaaacaacgaacagaatatgatattgaa
atgcttcgtgaaatgggttataccaatggtgttgaaaactattcccgtcatatggatggt
cgttctgaaggagaaccaccctatacactcttagactttttcccagaagattttttgata
atgattgatgaaagtcatatgacaatgggacaaattaaaggcatgtataatggtgaccaa
gcccgtaaaaagatgttggttgattatgggtttaggttgccgtctgcattggataataga
ccgttacgacgtgaagaatttgaaagccatgttcatcaaattgtttatgtttcagcaact
cctggtgactatgagatggagcaaacagatacaatcattgaacaaattattcgcccaaca
ggacttttagatcccattgtggaagtgcgtccaactatggggcaaatggatgatcttctt
ggggaaatcaatctacgctctgaaaaaggagagcgggtctttatcaccactctgactaaa
aaaatggcagaagatttaacagattacttaaaagaaatgggcgtaaaagtgaaatacatg
catagtgacatcaaaaccttagaacggacagaaatcattagagatcttcgtcttggcgtt
tttgatgtgctgattggaattaatcttttacgtgaagggatagacgtccctgaggttagc
ttggtggcaattcttgatgcagataaggaaggtttcttaagaaataccagaggtttaatt
cagacaattggtcgcgcagctagaaatgctgagggacgagttatcatgtatgccgacaag
atgacagattcaatgaaggcagctattgatgaaacggctcgccgtcgtcaaacgcaaatg
gcctataatgaagcccatggtattgttccacaaaccattaaaaaagagattagagatctt
atcacgattacaaaagctaaggatacggatagtctagaagaagcagctgacttctcagca
atgaatgcaagtgaacgaaaagaagctgttaagaaacttcagaaacaaatgcatgaagca
gctgaaatgcttgattttgagttggcggctgagattcgagatatgattttggaattaaaa
acgatgaactaa
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