Setaria italica (foxtail millet): 101759701
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Entry
101759701 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC101759701
Organism
sita
Setaria italica (foxtail millet)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVP_2
RVT_1
RT_RNaseH
RT_RNaseH_2
Retrotrans_gag
Integrase_H2C2
Ty3_capsid
NPR1_interact
rve
Asp_protease_2
gag-asp_proteas
zf-CCHC
Peptidase_A3
Asp_protease
Chromo
PNMA
Motif
Other DBs
NCBI-GeneID:
101759701
NCBI-ProteinID:
XP_022680992
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Position
III:complement(23946174..23964333)
Genome browser
AA seq
1567 aa
AA seq
DB search
MDGVPKPGAGGGKQAVPPVPAGSNAIARAARVPRRAAFPEDAAADSPAEAAAGAGSGGEE
DDDVQVERFYALLDNIRAMRGAYGAGDGDGDGTGADGVEAGSGWARKRLRAADPPWRPAF
RMEDFEEPSPTSSSHAAARHAKRTNRQRHREFMSHKPPTFSRSSDPLDAEDWLKTVEKML
NIAQCTDREKVLYASGRLEGPAADWWDAYTAAHANANGITWDEFRTSFRSHHIPSGLMKL
KKKEFLALKQGNMTVAEYRDKFIQLSRYAPEDVADDEQKQELFLDGLIGPLQYQLMSHTF
PSFQKMLDKAIGLEHKRNELGEMKRKFNSQLSSGSNTRPRFAPQQGTPFRAGGPSGNFGQ
QSFPRPAQQSFQRPSPQFQRPGMQTPRPGFTQNRQMTPTGTPARPNAPVGPTCFKCGEVG
HYASSCPKRGGPQPRNGNQTPQGNQGQQSFVRGKVNHMEAETAKEAPDVVLGMFFVNSAP
ASVLFDSGASHSFVTSHYVAKHNLSMHTMRRHMLVSSPGGSMKAQYICPQVKLRIMGIEF
PADLIVLESGGIDVILGMRWLAAFDATIQCAKRTVLLTGPDGEKVEFVATLPSAADCAVD
QLAGKSLEDIKVVCDYPDVFPDDLPGMPPDRDIEFAIDLLPGTAPISKRPYRMSVEQLKE
LKQQLEELSAKQFIRPSSSPWGAPVIFVPKKDGTQRMCVDYRALNEVTVKNKYPLPRIED
LFDQMRGAKVFSKIDLRSGYHQMKIRPFDIPKTAFTSRYGLFEYTVMSFGLTNAPAYFMY
LMNKVFMEYLDKFVVVFIDDIMIYSKSEEEHEEHLRLVLQKLREHQLYAKFSKCEFWIKE
VSFLGHIISDGGISVDPGKVRDVLKWNPPQTVTEIRSFLGLAGYYRRFIEGFSKIVKPLT
TLLEKGREFKWTEACQASFEELKKRLTTAPVLVMPDLHKGFDIYCDASRQGLGCVLMQEG
HVIAYASRQLRKHEQNYPTHDLELAAVVHALKIWRHYILGTKCQIYTDHKSLKYIFTXKD
LNLRQRRWLELINDYDLEIHYHPGKANLVADALSRKGHVNLALAFQLPDELMKEFERLNL
SVVAHTEGATMEVESTLEQEIRAGQLEDAKVKETKEMVKEGRATDFTEDSQGTLWVKGRI
WVPDVGNLXETILKEAHDSAYSIHPGSTKMYQDLKQKYWWPGMKKDVAAHVAICDICQKV
KAEHQRPAGLLQPLKVPEWKWEEIGMDFIVGLPRTRDGYDSIWVVVDRLTKVAHFIPVRT
TYTGSKLAELYMARIVCLHGVPKKIVSDRGTQFTSRFWQKLHESLGTRLNFSSAYHPQTD
GQTERTNQILEDMLRACALKHEGSWDKSLPYAEFSYNNSYQASLKMSPFEALYGRKCRTP
LYWSETGESQLFGPEIIQEAERQVQIIRENLRTAQSRQKSYADTRRRELTFEVGDYVYLK
VSPIRGMRRFKVKGKLSPRFIGPFKILERVGQVAYRLELPNQLSDVHDVFHISQLKKCLR
VPEEQLPMEELDVQDDLTYTEHPIKILDTMERVTRNRMIRMCKVQWSHHTEDEATWERED
ELQKEFP
NT seq
4701 nt
NT seq
+upstream
nt +downstream
nt
atggacggcgtcccgaagccaggcgccgggggcgggaagcaggctgtgccgccagtgccg
gccggcagcaacgccatcgcccgcgcagcacgagtgccgcggcgggcggcgtttcccgag
gacgctgcggctgactcgcccgcagaggcagcggcgggggcagggagcggcggcgaggag
gacgacgacgtgcaggtggagaggttctacgcactcctggacaacatccgggccatgcgg
ggtgcgtacggcgccggcgatggggacggcgacggcactggcgcggacggcgtcgaggcg
ggcagcggctgggcgaggaagcgcctgcgggccgcggacccgccgtggaggccggcgttc
aggatggaggacttcgaggagccctccccaacgtcgtcgtcccacgccgccgcgcggcac
gccaagaggacgaacaggcagaggcacagggagttcatgagccacaagcccccgacgttt
tcacgatcttcggatccattagatgctgaggattggctgaaaacagtggagaagatgctg
aatatcgcccagtgtactgacagggagaaggtcctgtatgcttcaggacgcctggaaggg
ccagctgctgattggtgggatgcttacaccgccgcacatgccaatgctaatggcattacc
tgggatgagttcaggactagcttcagaagtcatcatattccttctgggttgatgaagctt
aagaagaaggagtttcttgctctcaagcaggggaacatgacagtggcagagtacagggac
aagtttatccagttgtcccgatatgctcccgaagatgttgctgatgatgagcagaagcag
gagctattcttggatgggttgattggaccactccaatatcagcttatgtcacacaccttc
cccagtttccagaagatgctagacaaggcgattggcctggaacacaagagaaacgagctc
ggggagatgaagaggaaattcaattcccagttgtcttcaggaagcaacacccgccctcgc
tttgctccacagcaagggacgccgttccgcgcagggggcccaagtgggaattttgggcag
cagtcattcccgcgccctgctcagcagtcattccagcgccccagccctcagttccagcgt
ccagggatgcagacgccgcgccccggctttacgcagaaccgccagatgacccctactggc
actccagcaaggcccaatgctccagtgggtcctacttgcttcaagtgtggcgaggttggt
cattatgccagctcttgtcctaagagaggtggaccacaaccgaggaacgggaaccagacc
ccacaaggcaatcaggggcagcaaagctttgttcgtggcaaggtgaaccacatggaagcc
gagactgctaaagaggctccagatgtagtgctcggtatgttctttgtcaactctgccccc
gcatcagttttatttgactctggagcatcgcattcttttgtcactagtcattatgtagca
aaacataatttatccatgcataccatgaggcgccatatgctagtaagttcacctgggggg
tcaatgaaggctcaatacatctgtccacaagttaaactgagaataatgggtatagagttt
ccggctgatcttatcgtccttgagtccggtggaatcgatgtaattctgggaatgagatgg
ttagccgcttttgatgcgacaattcagtgtgctaagaggacagttctgctcacaggtcct
gatggagagaaagtggagtttgtagctactctaccctcagcggcagattgtgcagttgat
cagttggctggaaaatccttggaagatatcaaagtggtgtgtgactatccggatgtgttc
cccgacgatttaccaggtatgccacctgaccgcgacattgaatttgctattgatctttta
cctggtactgcacctatctccaaacgtccttatagaatgtcggttgaacaattaaaagaa
ttgaaacaacaactagaggaattatcagcaaaacagtttattcggcctagttcatcacca
tggggagcaccggttatctttgtgccaaagaaggacggtactcagaggatgtgtgtggat
tatagagcactgaacgaggtgaccgtcaagaacaagtacccgttgcctcgcattgaggat
ttgttcgatcagatgagaggagccaaggtattctccaagattgatttgcgatcgggatat
catcagatgaagatcaggccgtttgacatacccaagaccgcttttacttccagatatggt
ctcttcgagtacacggtaatgtcgttcgggctgacaaatgctccagcttacttcatgtat
ctgatgaataaggtatttatggagtacctggataagttcgttgtggtgttcattgatgat
attatgatttactccaagagtgaggaagaacacgaggaacacttgaggttagtgcttcag
aaattgagggaacatcagttgtatgctaaattcagcaagtgtgagttctggataaaggaa
gtctctttccttggtcatatcatctccgatggtggaatttcagtggatccaggcaaggtt
agggatgtcttgaagtggaatccgccgcagacggtaactgagatcaggagttttctcgga
cttgcaggctattaccgcagattcattgaaggattctccaagatagtgaagcccctcact
acgctcctagaaaaaggaagggaattcaaatggacagaggcatgtcaggcaagttttgag
gaactgaagaagaggttgaccacagctccagtattggtaatgccagatctacacaaaggg
ttcgacatatattgtgatgcatctcgacagggtttaggctgtgttctgatgcaggaaggt
catgtgatcgcctatgcttccaggcaattgaggaaacatgagcagaattatccgactcat
gatctggagttagccgccgtggttcatgccttgaagatttggagacactacattctgggg
actaagtgtcagatctatactgatcacaagagtctcaaatacattttcacttagaaggac
cttaatctgagacagcgacgatggctagagctcatcaatgattatgatctggagattcac
tatcatcctggtaaggctaacctggttgcagatgctttaagtcggaagggtcatgttaac
ttagccttagcattccagctacctgacgagttgatgaaagaatttgagaggctcaacttg
agcgtcgttgcgcatactgagggagcaacgatggaagtggagtcgactctagagcaagag
atacgggcaggacagcttgaggatgccaaggtcaaggaaactaaggagatggtaaaggaa
ggaagagccactgacttcacggaagactctcagggaaccttatgggtcaaaggaaggatt
tgggtacccgatgtgggaaatctctgagagacgatcttgaaagaagctcacgattctgct
tattccatccaccccggcagtaccaagatgtatcaagatcttaagcagaagtattggtgg
cccggaatgaagaaagatgtagctgcacatgtagccatatgcgacatatgtcaaaaggtc
aaggctgaacatcagagaccagctggattacttcagccattgaaggtgccagaatggaag
tgggaagaaattgggatggatttcattgtgggcttgcctcgcactcgagatgggtatgac
tctatatgggtcgtagtggatcgtttgaccaaggtagctcacttcataccggtaaggact
acctacactggatccaagctagcagagttgtatatggcaaggattgtgtgtttacatggt
gtgcctaagaagattgtgtctgatcgaggtacccagttcacgtcacgcttctggcagaaa
ttgcatgaatctctaggcacaaggttgaatttcagttctgcctatcaccctcagacagat
ggacagaccgagagaacaaatcaaatattggaggatatgttaagagcatgcgcattgaag
catgaaggcagttgggacaagagtctaccttatgcagagttctcctataataacagttat
caagccagtctcaaaatgtcaccatttgaggcattgtatggtagaaagtgccgaacaccc
ctttattggagtgaaacaggagagagtcaactattcgggccagaaattatacaagaggcg
gaaagacaagtccagatcatccgggaaaacttgaggactgctcaatctcgacagaagagt
tatgctgacaccaggaggagagaattgacctttgaggtaggtgattatgtgtatctcaag
gtatcgcccatcaggggtatgcgcagattcaaggtcaaagggaagctatcacctcgattc
atcggtccgttcaagattcttgagcgagtgggacaagtagcctatcgattggagttgcct
aatcagttgtcggatgtacacgatgtgttccatatctcacagcttaagaagtgcctcaga
gttcccgaggaacagttgccaatggaggaattggatgttcaggatgatctcacttacacg
gagcaccccattaaaattttggatactatggaaagggttacaagaaatcggatgatcaga
atgtgcaaggttcagtggagtcaccatacagaggacgaagcaacttgggaaagagaggat
gaattgcagaaggaatttccc
DBGET
integrated database retrieval system
