Setaria italica (foxtail millet): 101770247
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Entry
101770247 CDS
T02818
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101770247
Spliceosome [BR:
sita03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101770247
Complex C
U4/U6.U5 tri-SnRNP related factors
101770247
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Motif
Pfam:
MA3
Motif
Other DBs
NCBI-GeneID:
101770247
NCBI-ProteinID:
XP_004960688
UniProt:
K3Z3Z3
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Position
III:complement(5448986..5454396)
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AA seq
793 aa
AA seq
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MAASASPAASPPRRRHSHRDDESPRRRKRRASPSPPRSPSPGADADRRRRSRASPPDPDR
RRGDRDAKPSEEKENGHAKPGRDAEVYDRPPRRARVSDGEEDGDRRRRRARVSDDEKEDG
RRRRRARDSDEEREDRRGKRDRERDSRRHRRRSASSESGSSPDDRRRRRHRRDEGSRRRD
DRRRRDDDRGERRRSPEKKEPTPPLPPPPPLLPEMIPGRTGGIYIPPFRMAQMMREVEDK
SSPEYQRLTWDALKKSINGLVNKVNATNIKNIVPELFAENLVRGRGLFCQSCIKSQMASP
GFTDVFAALVAVVNTKFPEIGRLLLVRVVLQLKRAYKRNDKPQLLAATKFIAHLVNQVVA
HELVALELLTVLLENPTDDSVEVAAGFVKECGAMLQDLSPQGLHAIFERFRGILHEGEID
KRVQFLIEGLFAIRKAKFQGFPAIRPELDLVEQEDQFTHEISLEDDLDPETNLNVFRANP
NFVEDEKAYENLKRSILGAESSEDEEGSDAASDDEEEEESDEEEDEEEMEIRDRTETNLV
NLRRTIYLTIMSSVDFEEAGHKLMKIKLEPGQEMELCIMLLECCSQERTYLRYYGLLGQR
FCMINKVYQENFEKCFVQQYSMIHRLETNKLRNVAKFFAHLLGTDALPWHVLAYIRLTEE
DTTSSSRIFIKILFQELSEHLGIRLLNERLNDPNMQGSFESIFPKDHPKNTRFSINFFTS
IGLGGITESLREYLKNMPRLIMQQQKPESSESESSGSESGSESSGSGSSSESESESSSDE
SERRRSKKRRKRT
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctccgcctctcccgccgcctccccaccgcgtcgccgccacagccaccgcgac
gacgaatccccgcgccgccgcaagcggcgcgcgtccccgtccccaccccgctctccatcc
cccggcgccgacgcggaccgccgccgcagatctagggcttcaccgcccgaccccgaccgc
cgccgcggcgaccgcgacgccaagccctccgaggagaaggagaatggtcacgccaagccc
ggaagggacgcggaggtctacgaccgtcctccccggcgcgctagggtttcggatggggag
gaggatggcgaccgccggagaaggcgggctagggtttccgacgacgagaaggaggatggc
cgccggcggaggcgggctagggattcggatgaggagagggaggaccgccgcggcaagcgc
gaccgggagagggacagccggcgccaccgccgccgcagcgccagctcggagtcgggatcc
tcacccgatgaccgccgccggcgccgccaccgccgagatgagggctcgaggcggcgggat
gaccgaagacgcagggatgacgaccgtggggagcgtcggaggagccctgagaagaaggaa
ccgacgccaccccttcccccacctccgccgctgctgccggagatgatccctgggcgcacg
ggtgggatttacatcccaccattccgcatggcgcagatgatgcgggaggtggaggacaag
tcgagccctgagtaccagcggctcacctgggatgctctcaagaagagcatcaatgggctg
gtgaataaggtcaatgcgaccaatatcaagaatatagtgccggagctctttgcggagaac
cttgttcgtgggcgggggctcttctgccaatcgtgcatcaagtcacagatggcctcacct
gggttcaccgatgtttttgctgcacttgtcgcggttgtgaataccaagtttcctgagatt
gggcggttgcttcttgttcgtgttgtgctccagctcaagagggcatacaagcgaaatgac
aagccccaattgcttgcagcaaccaagttcatagcacacctggtaaatcaggtggtggca
catgagcttgtagcgctggagcttcttacggtactccttgaaaatccaactgatgatagt
gttgaggtggctgctgggtttgtcaaagagtgtggggccatgctacaggacctatctcca
caaggtcttcatgctatttttgaaagatttcggggcatacttcatgaaggagaaatagac
aagagagtacaatttttgattgaaggcctttttgcaattagaaaggctaaatttcaggga
ttccctgccatccgaccagagttggatcttgtggagcaggaggaccagtttacacatgag
atatcccttgaagatgacctagaccctgagaccaacctaaatgttttcagggcaaatcca
aattttgttgaagatgagaaggcctatgagaacctaaagagaagcatcctgggagcagaa
tcttctgaagatgaagaaggatcagatgccgcttctgatgatgaggaagaggaagaatct
gatgaagaagaggacgaggaagagatggagataagggatagaacagagacaaatcttgtg
aatctaagaagaactatatatttgactattatgtccagtgttgattttgaagaagctggt
cacaagcttatgaaaattaaacttgagcctggtcaagagatggagctgtgtattatgctg
cttgagtgttgcagtcaagagaggacatatcttcggtattatgggctgctaggacagcgg
ttttgcatgatcaacaaagtgtaccaagagaactttgaaaaatgttttgtgcaacaatat
tcgatgattcatcgccttgaaacgaacaagttgaggaatgttgccaagttctttgcacat
ttgttggggactgatgcactcccttggcacgttttggcttacatccggctgacagaggaa
gacacaacatcctcttctcggattttcataaaaattctattccaggagttatcggagcac
ctgggcatacgcctactcaatgagagacttaatgatcctaacatgcaaggttccttcgag
tcaatcttccccaaggatcatccaaagaatacaaggttctccatcaatttcttcacctcc
attggtcttggtggtatcacggagagcctgagggagtacttgaagaacatgccgcgcctc
ataatgcagcagcagaagccggaatcatctgaatcagaatcaagcggatcagaatctggt
tcagaaagctccggctcagggtccagttctgagtccgagtcggaatcaagctctgatgag
agtgaaaggaggcgaagtaagaagagaaggaagaggacttga
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