Sinorhizobium sp. RAC02: BSY16_3320
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Entry
BSY16_3320 CDS
T04514
Name
(GenBank) exodeoxyribonuclease III family protein
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
six
Sinorhizobium sp. RAC02
Pathway
six03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
six00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY16_3320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
six03400
]
BSY16_3320
Enzymes [BR:
six01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
BSY16_3320
DNA repair and recombination proteins [BR:
six03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
BSY16_3320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
AOF90734
LinkDB
All DBs
Position
complement(3436255..3437061)
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AA seq
268 aa
AA seq
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MALSIATWNINSVRLRMPLVEHFLKTFAPDILCLQETKCPNDLFPSKPLKALGYEHIVIH
GQKGYHGVATISRLPLTEIVERRDYCGVGDARHVSVLFHHRGKSIRLHNFYVPAGGDEPD
RTINTKFGHKLDFIEEMKLLHAEAEAGISSILVGDLNIAPLEHDVWSHKQLLKIVSHTPI
ETEGLTDVMTKGAWVDLMRRKVPAEEKLYTWWSYRSADWQAANKGRRLDHIWSSADLDPH
LTDIKVIREARGWERPSDHVPVIAEFDF
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atggcactttcgatcgcgacgtggaacatcaactccgtgcggctgcgcatgccgctcgtc
gagcacttcctgaagacgttcgcgccggacatcctgtgcctgcaggaaaccaaatgcccg
aacgacctcttcccctccaagccattgaaggcgctcggctacgagcacatcgtcatacac
ggccagaagggctatcacggcgtcgccaccatctcccgcctgccgctcaccgagatcgtc
gagcggcgtgactattgcggtgtcggcgatgcgcgccacgtctcggtgctcttccatcac
cggggcaagtcgatccgcctgcacaatttctatgtgccggccggcggcgacgagccggac
cgcacgatcaacacgaaattcggccacaagctcgatttcatcgaggagatgaagctgctg
catgccgaggccgaggccggcatttcctcgatcctcgtcggcgacctcaacatcgcgccg
ctggaacacgacgtctggtcgcacaagcagctcctgaagatcgtcagccacacgccgatc
gagaccgagggcctgaccgacgtgatgacgaagggcgcctgggtcgacctgatgcgccgc
aaggtgccggccgaggaaaagctctatacgtggtggagctaccgctccgccgactggcag
gccgccaacaagggccgccgcctcgaccacatctggtcctccgccgacctcgacccgcac
ctcaccgacatcaaggtgatccgcgaggcgcgcggctgggaacggccgtcggaccacgtg
ccggtgattgccgagttcgatttttaa
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