Shewanella japonica: SJ2017_0006
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Entry
SJ2017_0006 CDS
T04959
Name
(GenBank) Glycine--tRNA ligase beta subunit
KO
K01879
glycyl-tRNA synthetase beta chain [EC:
6.1.1.14
]
Organism
sja
Shewanella japonica
Pathway
sja00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJ2017_0006
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sja01007
]
SJ2017_0006
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sja03016
]
SJ2017_0006
Enzymes [BR:
sja01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
SJ2017_0006
Amino acid related enzymes [BR:
sja01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SJ2017_0006
Transfer RNA biogenesis [BR:
sja03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SJ2017_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
DALR_1
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
ARD20359
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All DBs
Position
complement(7719..9788)
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AA seq
689 aa
AA seq
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MNVENLLIEVGTEELPPKALRKLAESFLANFTEELTKAELAFTNATWYAAPRRLAISVEQ
LAVAQADKVVEKRGPAVAQAFDAEGNPTKAAMGWARGNGITVEQADRLKTDKGEWLLHQA
KVVGVETKSLIAAMAQKSLDKLPIPKPMRWGSNTTQFIRPVHTVTMLLGDELVPGELLGI
ESARTIRGHRFMGVDTFELEHADNYLTQLETEGKVLADYQRRKDIIKLNAEAAAKEIGGI
AELEDDLLEEVTALVEWPVVLTASFEEKFLDVPAEALVYTMKGDQKYFPVFDDAGQLLPN
FIFVTNIESKDPQQIISGNEKVVRPRLADAEFFFETDKKESLETRLASLESVVFQKQLGT
IKARVERISAMAGYIATSIGANSEEAARAGLLSKSDLMTNMVMEFTDLQGTMGMHYARLD
GETEAVAVALAEQYKPKFSGDTVPTAPISICVALAEKLDTLVGIFGIGQAPKGAADPFAL
RRAAIGILRLCLENNLPLDLVDLIAKAKELHGENLTNDKVSEQVLEFFMGRFRAWYQDQG
VGVDVILAVLARKPTAPADFESRIKAVAHFRTLEQASALAAANKRVSNILAKVEGEIPTN
IDSSLLVESAEKALADKLTELQPQLAPLFVAANYQEALALLASLRESVDTFFEDVMVMAD
DAALKNNRLALLNSLREQFLHAADISLLQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgaaaacttactcattgaagtgggtacagaagaattaccaccaaaggcatta
cgtaaattagctgagtcatttctcgctaatttcaccgaggaactaaccaaggcagagtta
gcgtttaccaatgcaacttggtatgcagcccctcgccgtttggcaattagtgttgaacaa
cttgctgttgcgcaagctgacaaagtggttgagaaacgcggccctgccgtcgctcaagca
tttgatgctgaaggaaacccaacgaaagccgctatgggctgggctcgtggtaacggcatt
actgttgaacaagctgaccgtcttaaaacagacaaaggcgaatggttattacaccaagct
aaagtggttggtgttgaaaccaagtctttaattgctgcaatggcacaaaagtcattagat
aaattacctatccctaagccaatgcgttggggtagtaatacaacacaatttatccgccca
gttcatactgtcaccatgctgttaggtgatgaactcgttcctggtgaattgttaggtatc
gaatcagctcgcactattcgtggtcatcgtttcatgggtgttgatacttttgagctagaa
cacgctgataactacctcacgcaattagaaactgaaggtaaagtcttagctgattaccaa
cgtcgtaaggatatcatcaagctaaatgctgaagctgccgcaaaagagattggcggtatt
gctgaacttgaagatgatttacttgaagaagtcaccgcattggttgaatggcctgttgtg
ttaacagcaagctttgaagaaaaattcttagatgtcccagctgaagccttggtttacacc
atgaaaggcgaccagaaatacttcccagtatttgatgatgcaggtcagttgttgcctaac
tttatcttcgtaactaacatcgaatctaaagatcctcagcagattatttcaggtaacgaa
aaagtagttcgtcctcgccttgctgatgcagagttcttctttgaaacagataaaaaagag
tcattagaaacgcgcttagccagcttagagtctgttgttttccaaaaacaattgggcacg
attaaagcccgtgttgagcgtatttctgcaatggctggctacattgccactagcataggt
gcaaacagtgaagaggccgctcgcgctggtctactgtcaaagtctgacttgatgacgaac
atggtaatggagtttaccgaccttcaaggcaccatgggcatgcattacgcacgcttagat
ggtgaaactgaagctgtcgcagttgccttagcagagcaatacaagcctaagttctctggc
gatactgtaccaacggcaccgatttcaatctgtgttgcgctggcagaaaagctagatacg
ctagtcggtatttttggtattggccaagcaccaaaaggcgcagcggatccatttgcactt
cgtcgtgctgctattggtattttacgtctttgcttagagaacaacttaccgttagattta
gttgacttgattgctaaagctaaagagttacatggtgaaaacctcacaaatgacaaggta
tcagagcaggttcttgagttctttatgggccgtttccgtgcatggtatcaagatcaaggc
gtgggtgttgacgtgatcctagctgttctcgcacgtaaaccaaccgcaccggcagatttt
gaaagtcgcatcaaagctgtggctcactttagaaccctagagcaagcctcagcgcttgcg
gcagcgaacaagcgtgtatcgaatatcttggctaaggttgaaggagaaatcccaaccaat
atcgattcaagcctattagtcgaaagtgctgaaaaagcattagctgataaactgactgag
cttcagccacagctggcaccattatttgtagcagcaaactaccaagaagcgctcgcatta
ttagcgagtctacgtgaaagcgttgataccttcttcgaagatgtaatggttatggcagat
gatgcagcacttaagaataaccgtttagcacttcttaatagtctacgtgagcaattctta
catgccgctgatatttcattattacaataa
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