Shewanella japonica: SJ2017_1087
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Entry
SJ2017_1087 CDS
T04959
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
sja
Shewanella japonica
Pathway
sja00061
Fatty acid biosynthesis
sja00071
Fatty acid degradation
sja01100
Metabolic pathways
sja01212
Fatty acid metabolism
sja02024
Quorum sensing
Module
sja_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SJ2017_1087
00071 Fatty acid degradation
SJ2017_1087
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJ2017_1087
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sja01004
]
SJ2017_1087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sja04147
]
SJ2017_1087
Enzymes [BR:
sja01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SJ2017_1087
Lipid biosynthesis proteins [BR:
sja01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
SJ2017_1087
Exosome [BR:
sja04147
]
Exosomal proteins
Exosomal proteins of breast milk
SJ2017_1087
Exosomal proteins of breast cancer cells
SJ2017_1087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ARD21418
LinkDB
All DBs
Position
complement(1302534..1304132)
Genome browser
AA seq
532 aa
AA seq
DB search
MAYDAESQLNLDQYHSLVDLIEKTCQQYGNNIAYACLGKNTTFKEIESASRHFAAYLQNH
TDLTAGDSIAIQLPNITQFVIAAYGAMRAGLVIVNTNPLYTERELIHQFNDSGTKALVVL
SDLLPTLNNVVSNTGISLVISTHALDLISPQPQIDTPFNKIEFNQMLLEGEQSTFTAVYP
KQTDLAALQYTGGTTGLSKGAMLSHRNMLANSAQVKSRIASTMTPGKDVFVAPLPIYHIY
AFMVNLVLYFESGSCSVLIPNPRDIPGLIKTMSSYPFTGFAGLNTLFVGLCHQPDFQALD
FSRLTITISGGTALTSAAANIWQKTTGCMISEGYGLSETSPVVSLNAPGYQQLGTIGKPV
LETQVKILDINDNEVPLGEAGELAVKGPQVMQGYWNKPQETANVMTEDGYFKTGDIAVAT
PDGFHKIVDRKKDMIIVSGFNVYPNEVEDVLSQHELILECAVVGVSDDKSGEAVKAVIVL
KEPTSDDAATKQLISDYCRSQLTAYKIPRLIEFTEQLPKSTVGKILRRELRK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatgacgcagaatcacagctcaacttagatcaataccactctctagtcgattta
atcgaaaagacctgtcagcagtacggaaataacattgcttatgcgtgtttaggaaagaac
accacatttaaagaaatcgagtccgcctcacgacattttgctgcgtatctacaaaatcac
actgatttaactgctggggacagcattgctattcaattgcccaatattactcagtttgtc
attgccgcatacggagccatgcgagcagggttggttatcgtcaatacaaacccactttat
actgaacgtgaactgatccaccaatttaatgattcaggcactaaagccttggttgtactt
tctgatttgctacccacgctcaataatgtcgtctcaaatacaggtatttcattagtcatt
agtacccacgccttggatttaatttcgcctcaaccgcaaatagataccccattcaataaa
attgaatttaatcaaatgctacttgagggtgagcaatccactttcactgctgtttaccca
aaacaaacagatctagccgcactgcaatacacaggtggcaccactggcttatcaaaagga
gccatgttaagtcatcgcaatatgctagctaactcggctcaagtaaaatctagaattgcc
agcacgatgacaccaggtaaagacgttttcgttgcgccattgccgatatatcacatctat
gcctttatggtgaatctagtactctatttcgaatcaggaagttgctcggttttaatccca
aacccaagagatatcccagggttaattaagaccatgagtagctaccctttcactggcttt
gcaggacttaacacgttatttgttggtttatgccaccaaccagattttcaagcactagac
tttagccgactcaccattaccatctctggcggaacggcgcttacaagtgctgcagcaaac
atatggcaaaaaaccacaggttgtatgatttcagaaggttatggtttatcagagacttca
cctgtcgtgagtttaaatgctcctggttatcaacaattaggcacgattggtaaacccgtt
ctcgaaacgcaggtaaaaattctcgatatcaatgataatgaagtcccgctaggtgaagca
ggagagcttgcagtaaaaggcccgcaagtcatgcaaggctactggaataaaccgcaagaa
acggccaatgtcatgaccgaagatggatatttcaaaaccggtgacattgcagttgcaaca
cctgatggttttcataaaattgtcgatcgcaaaaaagatatgatcattgtatcagggttt
aatgtttatcctaacgaagttgaggatgtattatcgcagcacgaattaatccttgaatgt
gctgtcgttggggtcagtgatgataaatctggtgaggcagttaaagcggtaatcgtttta
aaagagccaacatctgatgatgcagccacaaaacagctcatttcagactattgtcgcagc
caattaaccgcctataaaattccaaggttaattgaatttaccgagcaactacctaaaagt
accgttggtaaaattcttagacgagaactcagaaaataa
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