Shewanella japonica: SJ2017_1623
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Entry
SJ2017_1623 CDS
T04959
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
sja
Shewanella japonica
Pathway
sja00470
D-Amino acid metabolism
sja00550
Peptidoglycan biosynthesis
sja01100
Metabolic pathways
sja01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sja00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SJ2017_1623
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SJ2017_1623
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SJ2017_1623
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sja01011
]
SJ2017_1623
Enzymes [BR:
sja01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SJ2017_1623
Peptidoglycan biosynthesis and degradation proteins [BR:
sja01011
]
Precursor biosynthesis
Amino acid ligase
SJ2017_1623
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Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ARD21936
LinkDB
All DBs
Position
complement(1927658..1928680)
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AA seq
340 aa
AA seq
DB search
MTTFNVLLICGGGSAEHDVSVLSANFFESSLLQSNKINLLRVELDSNGHYFDSEGNSCEL
TNRREVRFDNDVKTPWTVDYVIPCIHGFPGETGDIQSYFNLIQLPYFGCESEASSNCFNK
ITAKMWFSALGIPNTPYIFLNDYNQSAIEQTQAALSKWGSVFVKAASQGSSVGCYKVDSQ
EQIAQVLKDAFSFAPSVVVEKTIIARELEVAVYEYLGKVIATLPGEIICADNTFYTFDEK
YNASSKARTDVVAGNLSQQNIDKIREYALKAFTGMKLRHLSRIDFFLTDDGEILLNEINT
FPGSTPISMFPKMMQNHGENFTDYLVDNIETQLTSLNTIR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgacgacttttaacgttctccttatttgcggtggtggcagcgctgaacatgatgtatct
gtgctatcggctaacttttttgaatcgtcattattgcaatctaataaaatcaatctgcta
agagttgagttagatagcaacggtcattattttgatagtgaaggtaatagttgtgaatta
actaatcggcgtgaagtacgatttgataatgatgtcaaaacgccatggacagtggattac
gtcattccttgtattcatggtttccctggtgaaactggcgatattcaatcttattttaac
ttaattcaattaccttactttggttgtgagtcagaagcatcgagtaattgttttaataaa
atcaccgccaaaatgtggtttagtgcactgggcatcccgaacacgccttacatttttttg
aatgactataatcaatcagctattgagcaaacccaagcagcactatctaaatggggctca
gtgtttgtaaaagcagcttcccaaggctcatctgttgggtgctacaaagtcgatagccaa
gagcaaatagcacaagtgttaaaagatgcatttagttttgcaccttcagttgtggttgaa
aaaaccatcatagcgcgcgagttagaagtcgcagtatatgaatatctaggtaaagtcatc
gccacgttaccaggcgaaattatttgcgccgacaatactttttatactttcgatgaaaaa
tacaatgcttcaagcaaagctcgaactgatgtagttgcaggaaatttatcacaacaaaat
atcgataagatcagagaatacgccttaaaagcatttacaggtatgaagttacgtcatttg
tcgagaattgacttcttcttaactgatgacggtgaaattttattaaatgaaattaatacc
ttccctggttctacacccatctcaatgtttccaaaaatgatgcaaaatcatggtgaaaat
tttaccgactatctcgttgataatattgaaacgcagttaacatctcttaataccattcgt
taa
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