Streptomyces janthinus: RI060_21195
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Entry
RI060_21195 CDS
T09385
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RI060_21195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjn03019
]
RI060_21195
Enzymes [BR:
sjn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RI060_21195
Messenger RNA biogenesis [BR:
sjn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RI060_21195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
WND19714
LinkDB
All DBs
Position
4647424..4648869
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AA seq
481 aa
AA seq
DB search
MPNANEETSSALSQVQHRAVSELLRVAPVADVLARRFQEAGFSLALVGGSVRDALLGRLG
NDLDFTTDARPQDVLKIVRPWADAVWEVGIAFGTVGAQKDGYQIEVTTYRSEAYDRTSRK
PEVSYGDSIEEDLVRRDFTVNAMAVALPEKEFVDPHGGLEDLASRVLRTPGTPEESFSDD
PLRMMRAARFAAQLDFEVAPEVVTAMTDMAGRIEIVSAERVRDELNKLVLSQYPRKGLTL
LVETGLADRVLPELPALRLERDEHHRHKDVYDHTLIVLEQAMALEDDGPDLTLRLAALLH
DIGKPRTRRFEKDGRVSFHHHEVVGAKMTKKRMTALKYSNELVKDVSRLVELHLRFHGYG
TGEWTDSAVRRYVRDAGPLLDRLHKLTRSDCTTRNKRKATALSRAYDGLEERIASLQEQE
ELDSIRPDLDGNQIMEILGVGPGPVIGRAYKHMLELRLENGPMEHDIALAALKEWWAEQE
S
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagaaacgtccagtgccctcagccaggtgcagcaccgcgcggtg
agtgaactgctgcgggtcgctcctgtcgccgacgtcctcgcccgccgcttccaggaggcc
gggttctcacttgccctggtcggcggctcggtgcgggacgcgctgctgggccggctcggc
aacgacctcgacttcacgaccgacgcccgcccccaggacgtcctcaagatcgtgcgcccg
tgggccgacgccgtctgggaggtcgggatcgccttcggcaccgtcggcgcccagaaggac
ggctaccagatcgaggtgacgacctaccgttcggaggcctacgaccggacctcgcgcaag
cccgaggtgtcgtacggcgactccatcgaggaggacctcgtccgccgtgacttcaccgtg
aacgcgatggccgtcgcgctgccggagaaggagttcgtcgacccgcacggcgggctcgag
gacctcgcgtcgcgtgtgctgcgcactcctggcaccccggaggagtccttctcggacgac
ccgctgcggatgatgcgggccgcgcgcttcgcggcccagctcgatttcgaggtcgccccc
gaggtcgtcacggcgatgacggacatggccggacgtatagagatcgtctcggccgagcgg
gtacgggacgagctgaacaagctggtcctgtcgcagtacccgcgcaagggtctgacgctg
ctcgtcgagaccggcctcgccgaccgcgtgcttcccgagctgcccgctctgcgcttggag
cgtgatgagcaccaccggcacaaggacgtctacgaccacacgctgatcgtcctggagcag
gcgatggcgctggaggacgacggtcccgacctgacgctccgcctggccgccctgctgcac
gacatcggcaagccgcgcacacgtcgtttcgagaaggacggccgggtctcgttccaccac
cacgaggtggtcggggcgaagatgaccaagaagcgcatgacggcactcaagtactccaac
gagctggtgaaggacgtctcccgtctggtcgaactccacctgcgtttccatggctacggc
accggcgagtggacggactcggcggtccgccgctacgtccgtgacgccggcccgctcctc
gaccgtctccacaagctgacccgctcggactgcaccacgcgcaacaagcgcaaggcaacg
gccctgtcgcgtgcgtacgacggtctggaggagcggatcgccagccttcaggagcaggag
gagctggactccatccgcccggacctcgacggcaaccagatcatggagatcctcggcgtc
ggccccggcccggtcatcggccgcgcttacaagcacatgctggagctgcggctggagaac
gggccgatggagcacgacatcgcgctggccgcgctcaaggagtggtgggccgagcaggag
agctga
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