Streptomyces kanamyceticus: CP970_03020
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Entry
CP970_03020 CDS
T06849
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ska
Streptomyces kanamyceticus
Pathway
ska03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ska00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP970_03020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ska03400
]
CP970_03020
DNA repair and recombination proteins [BR:
ska03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP970_03020
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP970_03020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
ABC_tran
AAA_29
SMC_N
AAA_21
DnaJ_CXXCXGXG
AAA_16
nSTAND1
RsgA_GTPase
AAA_22
APS_kinase
AAA_18
AAA_33
DUF4350
NACHT
MeaB
Viral_helicase1
NTPase_1
DUF87
Motif
Other DBs
NCBI-ProteinID:
QEU90013
UniProt:
A0A5J6G4Z1
LinkDB
All DBs
Position
768361..770763
Genome browser
AA seq
800 aa
AA seq
DB search
MHSRPHDPFVRVRGAREHNLQGVDVDIPRDVLAVFTGVSGSGKSSLAFGTIYAEAQRRYF
ESVAPYARRLIHQVGAPKVGEITGLPPAVSLQQRRSAPTSRSSVGTVTTLSNSLRMLFSR
AGTYPEGAERLDSDAFSPNTAAGACPECHGLGRVHRTTEELLVPDPSLSIREGAVAAWPG
AWQGKNLRDVLDTLGHDVDRPWRELPPEDREWILFTDEQPVVTVHPVRDAGRIQRPYQGT
YMSARRYVMKTFSDSKSQTLRAKAERFLTSAPCPACGGSRLRPEAMAVTFAGRTIAELAA
LPLSELADALAGAADSSETARVLTGDLLARIATVTELGLGYLSPDRATPTLSAGELQRLR
LATQLRSGLFGVVYVLDEPSAGLHPADTEALLTVLDRLKDAGNSVFVVEHHLDVVRHADW
LVDVGPQAGEHGGKVLHSGPVAELAGVDASATARFLFNDEPPADRQVRTPQGWLKLGPVS
RHNLREVTAEVPLGAFTAVTGVSGSGKSTLVGEITEELAGVGRLVCVDQKPIGRTPRSNL
ATYTGLFDVVRKVFAATGTAKERGYGVGRFSFNVAGGRCETCQGEGFVSVELLFLPSTYA
PCPDCAGARYNPETLEVTYHGRNIAQVLDLTVEAAADFFADTDTPAVVRSLRTLLDVGLG
YLRLGQPATELSGGEAQRIKLASELQRVRRGHTLYLLDEPTTGLHPADVEVLTHRLHELV
DAGNSVVVVEHDMAVVAGADWVIDLGPGGGDRGGLIVAAGTPAQVARAEGSRTAPYLARA
RGGTRPHRAQDVGSSGVPTA
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcacagccgcccccacgacccgttcgtccgtgtccggggtgcccgcgagcacaacctc
cagggcgtcgacgtggacattccgcgcgacgtgctcgcggtcttcacgggcgtctccggc
tccggcaagtcctcgctcgccttcgggacgatctacgccgaggcccagcggcgctacttc
gaatccgtcgcgccgtacgcccgcaggctcatccaccaggtgggtgccccgaaggtcggc
gagatcaccgggctgccgcccgcggtctcgctccagcagcgccgctccgcgccgacgtcc
cgttcgtccgtcggcacggtcaccactctctcgaattcgctgcggatgctgttctcacgt
gcgggcacctaccccgagggcgccgagcggctcgattcggacgcgttctcgccgaacacg
gccgccggtgcgtgccccgagtgccacggcctcggccgcgtgcaccgcaccaccgaggaa
ctgctcgtccccgacccctcgctctccatccgcgagggcgccgtcgcggcctggcccggc
gcctggcagggcaagaacctccgcgacgtcctggacacgctcggccacgacgtggaccgt
ccctggcgcgagctgccgcccgaggaccgggagtggatcctgttcacggacgagcaaccg
gtggtgaccgtgcacccggtgcgcgacgcgggccgcatccaacgcccttaccagggcacg
tacatgagcgcccgccgctatgtgatgaagaccttctcggactccaagagccagacgctg
cgcgcgaaggccgaacggttcctgacgagcgcgccgtgtccggcgtgcggcgggagcagg
ctgcgccccgaggcgatggcggtcaccttcgcgggccgtacgatcgcggagctcgcggcg
ctgccgctgtccgagctggccgacgccctcgcgggggcggcggattcgtcggagaccgcg
cgcgtcctgaccggggacctgctggccaggatcgcgacggtcaccgagctcggcctcggc
tatctgagcccggaccgcgcgacgcccaccctctcggcgggcgaactgcagcgccttcgc
ctggcgacgcagctccgctcgggcctgttcggcgtggtgtacgtccttgacgaaccgtca
gccggactccatcccgccgacactgaagccctgttgacggttctcgaccgcctgaaggac
gcgggcaactccgtcttcgtcgtggagcaccacctcgatgtcgtacgccacgcggactgg
ctcgtcgacgtggggccgcaggcgggcgagcacggcggcaaggtgctgcacagcggcccg
gtggcggagctcgcgggggtcgacgcgtcggcgacggcccgcttcctcttcaacgacgag
ccgcccgcggaccgtcaagtgcgcactccgcagggctggttgaagctcggcccggtgagc
cgtcacaatctgcgcgaggtgacggccgaggtcccgctcggcgccttcaccgcggtgacc
ggcgtctcggggtccggcaagtccacgctcgtcggtgagatcaccgaggagctcgcgggg
gtgggccgtctggtctgcgtggaccagaagccgatcggccgcacgccgcgctccaacctg
gccacgtacaccggcctcttcgacgtcgtacgcaaggtcttcgcggcgaccggcacggcg
aaggagcgcggctacggagtgggccggttctccttcaacgtggcgggcgggcgctgcgag
acctgccagggcgagggcttcgtcagcgtcgaactgctcttcctgcccagtacgtacgcg
ccctgcccggactgtgcgggcgcccgctacaaccccgagacgctcgaagtgacctaccac
gggcggaacatcgcgcaggtgctcgacctcacggtggaggcggcagcggacttcttcgcg
gacaccgacaccccggccgtcgtacgcagcctgcgcacgctgctcgacgtgggcctcggc
tatctgcggctcggccagcccgccaccgaactctccggcggcgaggcccagcgcatcaaa
ctggccagcgagttgcagcgggtgcgccgcggtcacaccctctacctcctggacgagccg
acgacgggcctgcaccccgccgacgtcgaggtcctcacccaccgtctgcacgagctggtc
gacgcggggaactccgtggtggtcgtggagcacgacatggcggtggtggccggtgccgac
tgggtgatcgacctgggccccggcggcggcgaccgcggtggactgatcgtggcggcgggc
accccggcgcaggtggcgcgcgccgagggcagcaggaccgccccgtacctggcgagggcg
cgcggcggcacccgaccgcatcgggcacaggatgtcgggtcctccggggtgcccactgcc
tag
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