Shewanella khirikhana: STH12_00686
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Entry
STH12_00686 CDS
T06711
Symbol
truC
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_00686 (truC)
Enzymes [BR:
skh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
STH12_00686 (truC)
Transfer RNA biogenesis [BR:
skh03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
STH12_00686 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZQ09825
UniProt:
A0A3Q9E5D5
LinkDB
All DBs
Position
793102..793911
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AA seq
269 aa
AA seq
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MQHDVPPGSAELAFADIAPEIEILYEDEALVAIHKPAGLLVHRTYLARKEHWFAMQLTRD
KVGCHVFPVHRLDRPTSGVLLFGKSSAVANHLCGQFASHSIRKHYLALVRGNMHEAGLLD
YPLKEELDELADKDVDPDKPAQDAITAYRPLLNSEIPYSSGRYPSSRFALMHLEPQTGRK
HQLRRHMAHLRHPIVGDTTHGDGKQNRFFREHFGVNRLWLIAKRLEITHPLTGLPLAIET
ELEPEWLSIFEGLGWDEASLSPDSPLIIA
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgatgttccacccggtagcgccgagcttgcctttgctgatatcgcccccgag
attgaaatcctatacgaagatgaggcgctggtggctatccacaagcctgcgggcttactg
gtgcatcgcacctatcttgcccgtaaggagcattggtttgcgatgcagctgacccgggat
aaagtgggttgccatgtgtttccggtgcatcgtctcgaccgtccaacctctggcgtgctg
ctgtttggcaagtccagcgctgtggcaaatcacctctgtggtcagttcgccagccacagt
attcgcaagcactatctggcgctggtgcgtggcaatatgcatgaagccggactgctggat
tacccgcttaaagaggaactggatgagctggccgataaagatgtcgaccctgacaaaccg
gcccaggatgccatcaccgcctaccggccgctgctgaacagtgaaatcccttactcatcg
gggcgttacccgagtagccgttttgccttgatgcaccttgagccccaaaccgggcgcaag
catcagttaagacgccatatggcgcatctgcgtcatcccattgtgggcgacaccacccac
ggtgatggcaaacaaaaccgcttcttcagggagcattttggagtaaaccggctgtggttg
attgccaagcggctggaaattactcatccactgacaggactgccgttggcaatagaaacg
gaactcgagcccgagtggctcagcatttttgaggggcttggctgggatgaggcaagtctg
tcaccggactcacctttgattattgcgtaa
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