Saccoglossus kowalevskii (acorn worm): 100370827
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Entry
100370827 CDS
T04123
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin A-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Pathway
sko04120
Ubiquitin mediated proteolysis
sko04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100370827
04120 Ubiquitin mediated proteolysis
100370827
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sko04121
]
100370827
Enzymes [BR:
sko01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100370827
Ubiquitin system [BR:
sko04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100370827
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-HC5HC2H
zf-RING-like
FANCL_C
Motif
Other DBs
NCBI-GeneID:
100370827
NCBI-ProteinID:
XP_002740241
LinkDB
All DBs
Position
Un
AA seq
553 aa
AA seq
DB search
HLIERSWYAVTETCLAFTVFREDFSPRFVAMFTFLLFLKCFHWLGEDRVDFMERSPIITW
VFHLRVAALLMFLGIIDAFFINHAYYSTITKGATVQLVFGFEYAILLIVVVNVFLKYVLH
TIDLQSENPWDNKAVYLLYTELFLGFFKVILYMAFMAVMIKVHTFPLFAIRPMYLTMRAF
KKALNDVIMSRRAIRNMNTLYPNATPEELSSGDNVCIICREEMVSACKKLPCGHIFHTNC
LRSWFQRQQSCPTCRMDILRAPIPTGQQQGQQTPQQQQQQQQQANMMPGQGPMMPQFPGG
FPMFIPPMVPGQFPMQQQQQPSTTQPASSTTATPTTSTSTQPTAVPGGAATTYTMPGSTM
AGFPGISPYMMPPMFSPPFTPPPMPPANFAGMNDEELRAMEGIERSHVEARVQCLRSIHT
LLDAAMIQIQQYYSLMSTMGPQANMYPAPASASASAPAPGVGTTPAEPTKQSDSVKGETQ
AATSEKPSSLQSDEDLSDLEGAVGFTPVEEVIIPEYHDEPVDEIDHQEIRRRRIERLESE
TNLAALDKESETK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
catcttatagaacgatcgtggtatgctgtcacagaaacgtgtcttgcatttacggtgttt
cgtgaagactttagtccaagatttgtcgctatgttcacatttttattgtttttaaaatgt
tttcattggttaggagaagatagagtagactttatggagagaagtccaataataacttgg
gttttccatctaagagttgcagcattgctaatgtttttaggaatcattgatgcattcttt
atcaatcatgcatactacagtacaataaccaaaggtgctacagttcagttagtctttgga
tttgagtatgctattctactgatcgtggtagtgaatgtcttcctaaagtatgtactgcat
acgatagatcttcaaagcgagaatccctgggacaataaagctgtatatttgctctatact
gaattattcttgggttttttcaaagtaattttatacatggcatttatggctgtaatgata
aaagttcataccttcccactgtttgctatcaggcccatgtatctaacaatgagggcattc
aagaaagcattaaatgatgtcatcatgtctagacgagctattcgtaatatgaacacactt
taccccaatgccactcctgaagagctgtcatctggtgacaatgtttgcatcatttgccga
gaggagatggtgagtgcatgtaaaaaactgccatgtggtcatatcttccacacgaactgc
ctgagatcatggttccagagacagcagagttgtcccacatgccgtatggatattctgaga
gctccaataccaacgggtcagcagcaaggacaacaaacccctcagcaacagcagcagcaa
cagcaacaggcaaacatgatgccaggacaaggcccaatgatgcctcagtttccaggtggt
tttccgatgtttattccacccatggtacctggtcagtttcctatgcagcaacagcagcaa
ccatccactactcaaccagcaagcagtacgacagcgacgccaacaacaagtacttcaacc
caaccaacagcagtgcctggtggagcagccaccacatacactatgcccggttcaacaatg
gcaggatttccaggcatttcgccttacatgatgccacctatgttttctcctcctttcact
ccaccaccgatgccccctgcaaactttgctggcatgaatgatgaggaattgcgggcaatg
gaaggtatagagagaagtcatgtggaagccagagtacaatgtttacgaagcattcataca
ttactggacgctgctatgatacaaatacagcaatactactcacttatgtctactatggga
cctcaagctaatatgtatcctgctccggcttcggcttcagcttcggcacctgctcctggt
gttggaaccacaccagctgaaccaaccaaacaaagtgattctgtcaaaggagagacacaa
gcagcgaccagtgagaaaccgtcttctcttcagtctgatgaagatttgagtgacctcgaa
ggtgctgtcggtttcacgccagtcgaagaagtaattattcccgaataccacgatgaacct
gttgatgaaattgatcatcaagagattcgaaggaggagaattgagcgactcgaaagtgaa
acaaatttggctgcactcgacaaggagagtgaaaccaaataa
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