Saccoglossus kowalevskii (acorn worm): 100371920
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Entry
100371920 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35-like
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
100371920
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100371920
Spliceosome [BR:
sko03041
]
Complex C
Other components
Complex C specific factors
100371920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
ABC_tran
AAA_19
nSTAND3
Helicase_RecD
AAA_7
AAA_16
WsaF_N
Motif
Other DBs
NCBI-GeneID:
100371920
NCBI-ProteinID:
XP_006816912
LinkDB
All DBs
Position
Un
AA seq
697 aa
AA seq
DB search
MSTLKPKFWKPGTDAPGTGLHEERERISEGSGEVVVYNPHVSISIEQQRQRLPIFKHRNH
ILYLVEKYETVVIVGETGCGKSTQIPQFLAEAGWTAEGHIVAITQPRRVAAVTVANRVAE
ERGSIIGNEVGYNIRFDDCTDATTTRIKFLTDGVLVREMMSDPLLTKYSVIMIDEAHERT
LYTDIIVGLLKKIQKKRPDLRLIISSATLDAEAFKDFFNNNETNDKSKDTSTIISVEGRT
YPVDIYYTISPVPDFIKETVNTIVKIHKTEPTGDILAFLTGQDEVENVVSLVIEQARHMS
DKQLKMKVLPMYGGLPASEQMRVFERTSKNTRKVVIATNIAEASITISGIVHVIDCGFVK
LRAYNPNTGLEGLVVVPVSQASAQQRSGRAGRVRSGKAYRLYTEEDFDKLPNSTVPEMQR
TNLATVILQLKCLGIDNVLRFNFLSPPSSKAMIRGLELLYALGAINDNAKLTEPLGVRMA
EFPLDPMFAKTLLTSGTFGCSEEILTIIAMLQVQNIFLSPSNQKAAAEKAKRKFSVAEGD
HITLLNVYEAYIKCGKSSRWCHEHYLNYRGLCRATSIRDQLKKIAKKFKVKMLNSEGDVD
VICRCIVAGFFSNAAKLHPSGSYRTIRDNYTLYIHPTSVLYVEKPPKWVIFNEILQTNKD
YMRDIMVIDASWLYELAPHYYQYGTEREIGAKKARLE
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacattgaaaccaaaattttggaagccaggaactgacgctcctggaactggtctc
catgaggaaagagaacgaataagtgagggaagtggagaggtagtggtgtacaatccacat
gtgtcaatatctattgaacagcaaagacaaagattaccaatattcaagcatcgcaatcat
atactgtatctagtggagaaatatgagactgtggtgatagttggagagactggatgtggt
aaaagcactcaaataccacagtttttagcagaggctggatggacagctgaagggcacatt
gtagccattacacaacccagaagagtagctgcagtcactgtagctaacagagtagctgaa
gaacgaggctctatcattggtaatgaggtcggttataacattcgttttgacgactgtacc
gatgccactacgaccagaatcaagtttctaacagatggtgtgctggtcagggaaatgatg
agtgatccgttgttaacaaaatatagcgtaataatgattgacgaagcacatgaacggacc
ctttataccgacatcatagtaggattgctgaaaaaaatacagaagaaaagaccagacttg
aggctaataatctcatcagcaactcttgatgctgaagcattcaaagacttttttaacaat
aatgaaacaaatgataaaagcaaagacacttcaaccattatatcagtagagggaagaaca
tacccagtggatatatattatactataagtcctgtgccagatttcatcaaggaaacagta
aatactatcgtgaaaatacacaaaactgaaccaactggcgatatattagcatttttgacg
ggacaagatgaagttgaaaatgtggtgtcacttgtaatagaacaagccagacatatgtct
gataaacagttgaagatgaaagtattgccgatgtatggtggcttgccagcatctgaacaa
atgagggtgtttgagaggacatcgaagaataccaggaaggttgtcatagcaaccaacata
gctgaagcttctattaccattagtggtattgtacacgttatagattgtgggtttgtgaaa
ctgagagcgtacaatccaaacactggtcttgaaggtcttgttgtggtgccagtatcccaa
gcatcagctcagcaaagatcagggcgagctggtagagtgagatctggtaaagcctatagg
ttatatacagaagaagactttgataagttgcctaactccacagtgccggagatgcaaagg
accaacttagcaacagttatcttacaactcaaatgccttggtatagacaacgtattgagg
tttaattttctctctcccccatcgtctaaagccatgatacgtggcttagaactgctctat
gcattgggggccatcaacgataatgccaagctaacggaaccactcggtgtgagaatggca
gagtttccactcgatccaatgtttgccaagacacttcttacttccggtacatttggctgc
tcagaagaaatacttacaattattgcaatgttacaagtacagaatatattcttatcaccg
tcaaaccagaaggcagcagccgagaaagccaaaaggaagttttctgtggccgaaggtgat
catataacactcttgaatgtgtacgaggcatatataaagtgtggaaaaagctctcgatgg
tgtcatgaacattacctaaactacagaggactttgcagagcaacgtcaatccgagaccaa
ctgaaaaagattgccaagaaattcaaagttaaaatgttgaacagcgaaggcgatgttgat
gtcatatgtcggtgtattgtagcgggattcttttctaatgccgctaaattgcatccaagt
ggttcatacaggactattagagataattacacattgtacattcaccctacatcagtgttg
tatgtggaaaaaccacccaaatgggttatttttaatgaaattctgcagacaaataaagat
tatatgcgagatatcatggtgatagatgcatcatggttatatgaactggcaccacattat
taccaatatggaacggagagagaaattggagcaaaaaaggctagactggaataa
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