Saccoglossus kowalevskii (acorn worm): 102804675
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Entry
102804675 CDS
T04123
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20-like
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
sko
Saccoglossus kowalevskii (acorn worm)
Brite
KEGG Orthology (KO) [BR:
sko00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sko03041
]
102804675
Enzymes [BR:
sko01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102804675
Spliceosome [BR:
sko03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
102804675
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_19
AAA_22
AAA_30
PRIMA1
Motif
Other DBs
NCBI-GeneID:
102804675
NCBI-ProteinID:
XP_006821228
LinkDB
All DBs
Position
Un
AA seq
886 aa
AA seq
DB search
MASIRTAHNISQRQRTSDVLLSENIDFAGLLLSDAVQQGLSNAGFEKPSPIQLKAIPLGR
CGLDLIVQAKSGTGKTCVFSVISLESLHLDSSSTQVLVLAPTREIAVQIQDVILSIGSAI
SQLRCHVFIGGLPLAQDKIKLHKCHIAVGTPGRIKQLIEEDLLHANTIRLFILDEADKLL
EENFQEQINWIYSSLPENKQMLALSATYPEYLAQQLTSYMRDPVFVRLNPKDLALQGLVQ
YYELVPHHALPHKQFEVKVQHLLKLFSQVSFNQCLVFSNYQTRAQNLSDQLCHKGWPSTY
ISGSQDQTQRLQAMSMLKNFKCRVLISTDLTARGIDAEKVNLVINLDVPFDSKTYLHRIG
RAGRFGTQGIAVTYAAHGTEEQHLRAIEKECFISMKPLPDIISSNLIQQEHGNFTQSQSV
PQSTPQINGNLQEFTLSGQTSSKTDANNASVITKSLDVKENMMNKKEHCNSIRKATSVAK
KDDDNKSVCGSKSHKCCWIGQRNVSDNLVTTAEFSCQTERIRDYDYLGIGKIQPVSMCRV
NKVPKMKITYENALKDFEDFLVTDDTNVESWMRFYVDDDCKDQFEALPLEKKDPKCSTDI
NADIQDAAIIEQGVDIALDSFDGHTNVADTVIVKPICDSNNALLDEEIIFKQTNNETLQY
YLEDPAQHGSVQSKDVVSEESLHRDDEMHVELSFRDLKISEECSTLNSESLKAEDEEDET
SVVSEVSESDETQTETEDEDDIEEEDTSDDDDEEEYDDEEEEEEEEEEESYKLNSHPHAS
PQVWEDANYRGYNNHTKCASHEMYPYYANYPANDYHPSSQNAGLYSNDRAQHLYNQASYM
HHYGTPPPLPPPPPPPPQWNHVINSADWYNEYWYQTWLYWYNYPRQ
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcatctatacgaactgcacacaacataagccagcgacaaagaacgagtgatgttctg
ctcagtgaaaatattgactttgctggtttattattatcagacgcagtgcaacaaggttta
tcgaatgctggttttgaaaaaccttctccaatacagctaaaggcaatcccgcttggcaga
tgtggtttagatttaattgtgcaagctaagtctggtactggcaagacatgtgtatttagt
gttatatccttggagtctctacatctggattccagtagcactcaagttcttgtgttggca
ccaactagagagattgctgtgcaaatccaagatgtcatcctgtctattggtagtgccata
tcacagctcagatgtcatgtctttataggaggtctcccactagctcaggataagattaaa
ttacataaatgtcacattgctgtaggaacaccaggtcgtatcaagcaattgatagaggaa
gatttgttacatgcaaataccatcagactttttattttagatgaagcagataaattgctg
gaggagaacttccaagaacagataaattggatttattcatcgctacctgaaaacaagcag
atgctagccttgtcagccacatatcctgagtacttggctcaacagcttacttcctatatg
agagatcctgtctttgtgagactcaacccaaaggatcttgccttgcaaggtcttgtacaa
tattatgagctggtaccacaccatgctcttcctcataaacagtttgaggtcaaagttcag
catttattaaaactctttagtcaagtatcattcaatcaatgtctagtattttccaactat
cagactagagctcagaatctttctgatcagctatgccataaaggatggccaagtacttac
atttctggtagccaggatcaaactcaaagactccaagctatgtctatgctcaaaaacttt
aagtgtagagttcttatctccacagatctgactgctagaggcattgatgcggaaaaggtt
aatcttgtcatcaacctggatgtaccatttgattctaagacatacttacaccgtattggt
agagctggtagatttggaactcaaggtatagcagtcacttatgcagcacatggcacagaa
gaacaacatttaagggcgattgagaaagaatgtttcatatccatgaaaccattgccagac
attatcagcagtaatttgattcaacaggagcatggtaatttcacacagtctcaatcagtg
cctcaatctacaccacagatcaatggcaatttacaagaatttactctgagtgggcagaca
tcgagtaaaactgatgctaacaatgcttctgttataacaaagagtttagatgtcaaagaa
aacatgatgaacaaaaaggaacactgtaactcgatcagaaaggccacatcagttgcaaaa
aaagatgatgataataagtctgtatgtggttctaaatctcataaatgctgctggattggc
caaagaaatgtatctgataacttagttacaacagctgaatttagttgtcagacagagcgt
atcagagattatgactacttaggtatcggcaaaatacaaccagtgtccatgtgcagagta
aataaagttccaaaaatgaagatcacttatgaaaatgcactaaaggactttgaggatttc
ttagtgactgatgacacaaatgtagaaagttggatgagattttatgtagatgatgattgt
aaagaccaatttgaagcattgccgttggaaaaaaaggatcccaagtgtagtactgatata
aatgctgatatacaggatgctgccatcatagaacaaggtgtggacattgccttagactct
tttgatgggcatacaaatgtagctgatactgtgattgtaaaaccaatatgtgattctaac
aatgctttgttagatgaggaaataattttcaaacagactaacaatgaaacattacagtat
tatctcgaagatcctgcacaacatggaagtgttcaatcaaaggatgtggtgagtgaggaa
tcacttcatcgagatgatgagatgcatgttgaactgtcatttagggacttgaaaataagt
gaagaatgctcaacactcaattctgaaagtttaaaagcagaggatgaggaagatgaaacc
tcagttgtaagtgaagttagtgaaagtgatgagacacagacagagacggaagatgaggat
gatattgaagaggaagacactagtgatgatgatgatgaagaagaatatgatgatgaggaa
gaggaggaggaggaagaagaagaagaatcctataaactaaactcccatccacatgcctca
cctcaagtgtgggaagatgctaactatagggggtataacaatcatactaagtgtgcaagt
cacgaaatgtatccatactatgcaaattatcctgccaatgattatcacccaagctcacaa
aacgcgggactgtattcaaatgatagagcacaacatttgtataaccaagcttcttacatg
catcattatggtaccccaccgcctctgccgccgccgccaccacctcctccacagtggaat
catgttataaattcagctgactggtacaatgagtattggtatcagacatggctgtattgg
tacaactatccaaggcaataa
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