Sphingomonas koreensis: BRX40_12205
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Entry
BRX40_12205 CDS
T04828
Name
(GenBank) LysR family transcriptional regulator
KO
K16516
LysR family transcriptional regulator, regulator for genes of the gallate degradation pathway
Organism
skr
Sphingomonas koreensis
Brite
KEGG Orthology (KO) [BR:
skr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skr03000
]
BRX40_12205
Transcription factors [BR:
skr03000
]
Prokaryotic type
Helix-turn-helix
LysR family
BRX40_12205
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_24
HTH_30
Motif
Other DBs
NCBI-ProteinID:
APR53089
UniProt:
A0A1L6JAX8
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Position
complement(2530737..2531939)
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AA seq
400 aa
AA seq
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MIQPFDLNLRHLRALSAVIAEGSLSRAADAAGLSQPALTQGLGKLERQLEVQLFERRPDG
VAPTEAGHALAERVARAFDYLAGGVRRFARMGRGFSRPERLMTATQLDAFLHFADAQSFV
GAAQASGLSQPAIHRAVRDLEQICATPLAERRGRGVALTAAGRLLARGARLAQQEIAAGI
IEVRGDEREGGRIAIGAMPLSRALVLPRALADLLRAAPNAVVDVVEGSWRELVEPLADGI
IDLTIGALREEAPPGLAQEVLFTDQLAIFGRPGHPALGGTIGLATLRAQQWIVGPAGTPL
RTHWEALFAGAPLPHVPVECGSVMVIRGLLTQSDLLTLLSPDQVALEVESGVLTQIGPLL
PSAIRTIGLTTRTGWRPTPVQRMLLDLIRAAARDTRLPEK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgatccagcccttcgacctcaaccttcgccacttgcgcgcgctctccgccgtcatcgcg
gaaggcagcctcagccgcgcggccgatgctgcgggcctgtcgcagcccgcgttgacccag
ggcctgggcaagctcgagcgccagcttgaggtgcagttgttcgaacgccgccccgatggt
gtcgcgcccaccgaagccgggcatgcgcttgcagaacgcgtcgcgcgcgcgtttgactat
ctggccggcggcgtccgccgtttcgcgcgcatgggccgcggcttctcgcgccccgagcga
ttgatgaccgcaacgcagctcgacgcctttctccacttcgcggacgcgcagagcttcgtc
ggcgcggcgcaggcgagcggcctttcccaacccgccatccatcgcgcggtacgcgatctc
gagcagatctgcgcgacgccactcgccgaacggcgcggacggggagtcgcgctcaccgca
gcgggacggctgctggcgcgcggtgcgcgtctcgcacagcaggagatcgccgcgggcatc
atcgaggtgcggggagatgagcgggagggaggacgcatcgcgatcggcgcgatgccattg
agccgcgcgctcgtgcttccccgcgcgctggcggatctgctccgcgctgcaccgaacgcg
gtggtcgatgtggtcgagggatcgtggcgcgaactcgtcgagccgctcgccgacggcatc
atcgacctgaccatcggagcgctgcgcgaggaggcgccgccaggcctggcgcaggaagtc
ctgttcaccgaccagcttgcgatcttcgggcgacccggccaccctgcgctcggcggcacg
atcggcctggccacgctccgtgcgcagcaatggatcgtcgggccggccggaacgccgctt
cgcacgcattgggaagccttgttcgcaggcgctccccttccccatgttccggtcgaatgc
ggttcggtgatggtgatccggggcctgttgacccagagcgatctgctgacgctgctctcc
cccgatcaggtcgcgctcgaagtcgaaagcggtgtgttgacccagatcggaccgctactc
ccctccgcgatacggaccatcggcctcacgacccgcaccggctggcggcccacgccggtc
cagcgcatgctgctcgacctgatccgcgcggctgccagggacacaagacttccggaaaaa
tga
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