Skermanella sp. TT6: IGS68_08440
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Entry
IGS68_08440 CDS
T07020
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
skt03021
]
IGS68_08440 (rpoH)
Transcription machinery [BR:
skt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IGS68_08440 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
UCR_14kD
HTH_11
DUF4250
Motif
Other DBs
NCBI-ProteinID:
QQP91220
LinkDB
All DBs
Position
complement(1808289..1809173)
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AA seq
294 aa
AA seq
DB search
MSNTPSVPVISSEGNLARYLQEIRKFPMLEPQQEFMLAKSWREHGDTEAAHKLVTSHLRL
VAKIAMGYRGYGLPLSELISEGNVGMMQAVKRFDPDRGFRLATYAMWWIRAAIQEYILHS
WSLVKMGTTAAQKKLFFNLRKLKGQMQAIDEGDLSPEHVTQIATKLDVPEQDVVNMNRRL
ASPDHSLNAPLRADSEGEWQDWLVDEKDTQEIHLAEREELTKRRALLKSAMTNLNERERH
ILTERRLRDEPTTLEDLSQHYGISRERVRQIEVRAFEKLQKNIKNAAIEQRLAQ
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacactcccagcgttccggtgatcagttccgaaggcaatctggcccgttacctt
caggaaatccgcaagttccccatgctggagccgcagcaggagttcatgctcgccaagtcc
tggcgggagcacggcgacaccgaggccgcccacaagctggtgaccagccatctgcggctg
gtcgcgaagatcgccatgggctaccggggctacggcctgccgctgtccgagctcatctcg
gaaggcaatgtcggcatgatgcaggcggtcaagcggttcgacccggaccgcggcttccgg
ctggcgacctacgccatgtggtggatccgcgccgccatccaggaatacatcctgcacagc
tggtcgctggtcaagatgggcacgacggccgcgcagaagaagctgttcttcaacctgcgc
aagctgaagggccagatgcaggcgatcgacgagggcgacctgtcgccggagcacgtgacc
cagatcgcgaccaagctcgacgtgccggaacaggacgtggtcaacatgaaccgccgcctg
gccagccccgaccattcgctgaacgcgccgctgcgcgccgacagcgagggcgagtggcag
gactggctggtggacgagaaggacacccaggagatccacctggccgagcgggaggagctg
accaagcgccgcgccctgctgaagagcgccatgaccaacctgaacgagcgcgagcggcat
atcctgaccgagcggcgcctccgggacgagccgaccacgctggaggacctgtcgcagcac
tacggcatcagccgcgagcgtgtgcgccagatcgaggtccgggcgttcgagaagctccag
aagaacatcaagaacgcggcgatcgagcagcggctggcccagtag
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