Skermanella sp. TT6: IGS68_08445
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Entry
IGS68_08445 CDS
T07020
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skt03009
]
IGS68_08445
Enzymes [BR:
skt01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
IGS68_08445
Ribosome biogenesis [BR:
skt03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IGS68_08445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
QQP91221
LinkDB
All DBs
Position
complement(1809307..1810368)
Genome browser
AA seq
353 aa
AA seq
DB search
MTADEEDEMEDPDGEADPEGEPFSFTAAEADRGERLDKLLACGLDGLSRTRIRSLIDQGR
VSSLGRTIADASLRVKPGQTFDVLVPEPEPALPVPQEIPLAVAYEDDDLLVIDKPAGMVV
HPAAGNADGTLVNALLWHCGDRLSGIGGVRRPGIVHRLDKETSGLMVVAKNDLAHGGLAA
QFADRSLSRTYHAVVAGVPSPARGEITGDIGRSPSDRKKMAVVAGGKPALTRYRVLKAFG
TWASLVECTLATGRTHQIRVHMTHVGHPLIGDPVYGVRKNGIRGASRGIGPGAASARARG
LPEPVRDAVVALDRQALHAVALRFNHPRDARPMQFESELPLDIQRLIGSLESI
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgacgaagaggacgagatggaagacccggacggcgaagccgatccggagggc
gagccgttcagcttcaccgcggccgaggccgaccggggcgagcggctggacaagcttctg
gcctgcgggctcgacggcctgtcgcgcacccgtatccgctcgctgatcgaccagggtcgg
gtttcgagtctcggccggacgatagccgacgcgtcattgcgggtcaaacccggccagacc
ttcgacgtcctggtgcccgagccggagccggcgcttcccgtcccccaggaaatcccgctc
gccgtcgcctacgaggacgacgacctgctggtgatcgacaagcccgccggcatggtggtc
catccggccgcgggcaacgccgacgggacgctggtcaacgccctgctgtggcactgcggc
gaccggctgtccggcatcggcggcgtgcgccggcccggcatcgtccaccggctcgacaag
gagaccagcgggctgatggtggtggccaagaacgacctggcgcatggcggcctcgccgca
cagttcgccgaccggtcgctcagccgcacctaccacgcggtcgtggccggagtcccctcc
cccgcccggggcgagatcaccggcgacatcgggcgcagcccgtcggaccgcaagaagatg
gcggtcgtcgccggcggcaagcccgccctgacacgctaccgcgtgctgaaggcgttcgga
acctgggcgtcgctcgtggaatgcaccctggcgaccgggcggacacatcaaataagggtg
catatgacccatgttggacatcccttgatcggcgatccggtttatggtgtccgtaaaaat
ggtatcagaggcgcatccaggggaatcggacccggggccgcgtccgccagggcccgcgga
ctcccggaaccggtccgggacgcggttgttgccctggatagacaggccctgcacgccgtg
gcgctgcggttcaaccacccgcgcgacgcccggccgatgcagttcgaatccgaattacct
ttggacatccaaaggttaataggcagcttggaatcgatttaa
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