Skermanella sp. TT6: IGS68_11330
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Entry
IGS68_11330 CDS
T07020
Symbol
nfi
Name
(GenBank) deoxyribonuclease V
KO
K05982
deoxyribonuclease V [EC:
3.1.21.7
]
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skt03400
]
IGS68_11330 (nfi)
Enzymes [BR:
skt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.7 deoxyribonuclease V
IGS68_11330 (nfi)
DNA repair and recombination proteins [BR:
skt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
IGS68_11330 (nfi)
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Gene cluster
GFIT
Motif
Pfam:
Endonuclease_5
DUF99
Motif
Other DBs
NCBI-ProteinID:
QQP91750
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All DBs
Position
complement(2409435..2410088)
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AA seq
217 aa
AA seq
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MIEPWPTTEAEARVVQEDLRGRVITHDDFPPLRRIAAVDAHYSDSDGMTWAAVAELDPGT
LELTRSVLLARPTVFPYVPGYLSFREVPAMAAAVGLLPEPPDLLIVDGQGMAHPRRFGLA
CHLGVVTGLPAIGVAKSRLVGRYEEPGRRRGSSSPMFHRRELVGVALRTRDGTNPLFVSV
GHRVSLPTAVDLVLRFAPKWRLPEPIRLADAISRMHR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaccctggccgaccaccgaggccgaggcccgcgtcgtgcaggaagacctgcgc
ggccgcgtcatcacccatgacgatttccccccgctccgccgcatcgcggccgtcgacgcg
cattacagcgactccgacggcatgacctgggcggcggtggccgaactcgaccccgggacg
ctggaactgaccaggtccgtcctgctggcccggccgacggtcttcccctacgtgccggga
tacctgtcgttccgggaggttccggccatggcggcggcggtcggcctgctgcccgaacca
ccggacctcctgatcgtcgacgggcagggcatggctcatccacggcgtttcgggctcgcc
tgccacctgggcgtggtgacggggctgccggcgatcggcgtcgccaagtcgcggctggtc
ggccgctacgaggagccgggccgccggcgcggctcctcctcgcccatgttccaccgacgg
gagctggtcggggtggcgctgcgcacccgtgacggcaccaatccgctcttcgtgtccgtc
ggtcaccgggtaagcctgcccaccgccgtggacctggtgctccgcttcgcgccgaaatgg
cgcctgccggagccgatccgcctcgccgacgccatctcgcgcatgcaccgctga
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