Skermanella sp. TT6: IGS68_11615
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Entry
IGS68_11615 CDS
T07020
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
skt
Skermanella sp. TT6
Brite
KEGG Orthology (KO) [BR:
skt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skt03009
]
IGS68_11615
Enzymes [BR:
skt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
IGS68_11615
Ribosome biogenesis [BR:
skt03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IGS68_11615
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltransf_31
Ubie_methyltran
Methyltransf_25
BMT5-like
PCMT
Methyltransf_3
FtsJ
MTS
Methyltr_RsmF_N
Methyltransf_12
GCD14
TetR_C_16
Methyltransf_24
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QQP91803
LinkDB
All DBs
Position
2470845..2472161
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AA seq
438 aa
AA seq
DB search
MTPGARLQAAIELLDEVEVTPRPADAVISAFFRARRFIGAKDRAAVAETVYGVLRRHARL
RWWFQHAGGFPVTARTLLIADQILAQGRPADHLDKLFSGGRFAPAQFSQGEIRLANKLDG
HTLDHPGMPEEVAVECPDWAAGHLREFFGDRFVPELAALLDPAPLDLRANPVKADRDAAL
AALAAAGIEGEPTRWSPFGIRIHGRPPLASTDAFKSGMVEIQDEGSQLIGLLTDAKPGHQ
VVDFCSGAGGKALAIAAGMQNKGRLVACDVLEKRLKRAAERIRRAGLHNVETRALSSERD
PWVKRHKGKFDRVLVDAPCTGTGTWRRNPDSRWRLLGPGLEELEKLQHGILDSAARLVKP
GGRLVYATCSMLPQENERQVEAFLAAHPDFAVKPVDELWTSAVGTAGPGTGPFMRLSPAR
HGTDGFFAAVLERGSAAE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacccccggcgcccgcctgcaagccgccatcgaactcctcgacgaggtggaggtgacc
ccgcgtccggcagacgccgtgatcagcgccttcttccgcgcgcgccgattcatcggtgcg
aaggatcgcgccgccgtggccgagacggtctacggcgtgctgcgtcgccacgcgcggctt
cgctggtggttccagcatgccggcggcttcccggtcacggcgcgcacgctgctgatcgcg
gaccagatcctggcccaggggcgaccggccgaccatctggacaagctgttcagcggcggc
cgattcgcgccggcccagttcagccagggggagatccggctggccaacaagctcgacggc
cacaccctggaccaccccggcatgccggaggaggtggcggtcgaatgcccggactgggcg
gccgggcacctgcgcgagttcttcggcgaccggttcgtgccggaactggcggccctgctc
gaccccgctccgctcgacctcagggcgaatccggtcaaggcggaccgcgacgcggcgctg
gcggcgctggccgccgccgggatagagggcgagcctacccgctggtcgccgttcggcatc
cggatccacgggcggcctcccctggcctcgaccgatgcgttcaagagcgggatggtcgag
attcaggacgagggctcgcagttgatcgggttgctgaccgacgcgaagcccggacatcag
gtggtggatttctgctccggagccgggggcaaggcgctggcgatcgcggccggcatgcag
aacaagggccggttggtcgcctgcgacgtgctggagaagcggctgaagcgcgcggcggag
cggatccgccgtgccggcctccacaatgtcgagacccgggcgctgtccagcgagcgcgat
ccctgggtgaagcgccacaagggaaagttcgaccgagtcctggtggatgcgccctgcacc
ggcacgggcacctggcggcgcaacccggacagccgctggcggcttctcgggccggggctg
gaggagttggagaagctccagcacggcatcctcgactcggcggcgcggctggtgaagccg
ggcgggcggctggtctacgcgacctgctccatgctgccccaagagaacgagcggcaggtc
gaagccttcctggcggcccatcccgacttcgcggtcaagccggtggacgagttgtggacc
agcgccgtcggcaccgccggcccgggaaccggccccttcatgcgcctgtcgccggcgcgc
catggcacggacggcttctttgccgccgtgctggagcgcgggagcgccgccgaatga
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