KEGG   Skermanella sp. TT6: IGS68_28570
Entry
IGS68_28570       CDS       T07020                                 
Symbol
icmH
Name
(GenBank) type IVB secretion system protein IcmH/DotU
  KO
K11892  type VI secretion system protein ImpK
Organism
skt  Skermanella sp. TT6
Pathway
skt03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:skt00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    IGS68_28570 (icmH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:skt02044]
    IGS68_28570 (icmH)
Secretion system [BR:skt02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   IGS68_28570 (icmH)
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: QQP93113
LinkDB
Position
pTT6-1:160589..161893
AA seq 434 aa
MTADRTAIIPADVFLGLQRGYDTVDPPGQDSSRPWERISLGRTSPLVMAAAPLLSLCGRI
RSQASHADVDTLRLHVLGEIDRFERRITPLGLSARSIRAGKYALCATIDDIVLNTPWGGN
SVWTTRSMVGTLFSETWGGDRFFDLLAQLKRDPGNNIDLIELLYYCISLGFEGKYRIAPR
GASELATVREDLYRLICNVRGDFERDISPHWRGTGLGHRGPDAVVPPWIAAAVAAALLIL
LICGLALAINRRSDAMFSDLAALPPAGAVDLIRAAPAPPPPPPPPEVAAGRTEALRKFLE
PEIRDGLVSVREDAQTIGVRIAGDGMFSSGRADVLERFEPLLARIGQALNDQPGEILVTG
HTDSLPIRSLKFPSNWDLSLARAKAAAALIGGAMADPSRLTSEGKDSSQPVASNDTDQGR
KLNRRIELVILKAQ
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgaccgccgaccggaccgcgatcattcccgccgacgtcttcctgggtctccagcggggc
tacgacacggttgacccgccagggcaggactcgtccaggccgtgggagcggatcagcctc
ggccgtaccagtccgctcgtcatggcggcggcaccgctgctcagcctgtgcgggcgcatc
aggagccaggcgtcgcatgccgacgtcgataccctgcgcctgcatgtcctgggcgagatc
gaccgtttcgagcgcaggatcacgcctctcggcctgtcggcgcgttcgatccgggcgggc
aagtacgctctctgcgcgacgatagacgatatcgtcctcaataccccctggggcggcaac
agtgtctggacgacccggagcatggtcggcacgctgttcagcgaaacctggggcggcgat
cgcttcttcgacctgctggcccagctgaagcgggatcccggaaacaacatcgacctgatc
gagctgctctattactgcatcagcctcggtttcgagggaaagtaccggatagcgccgcgc
ggcgcgtcggaactcgccacggttcgcgaggacctgtatcgcctgatctgcaacgtccgg
ggcgacttcgagcgcgacatctctccgcactggcgcggtaccggcctcggacatcgcggc
cccgatgccgtggtgccgccctggatcgccgcggcagtggctgcggccttgctgatcctg
ctcatctgcggtctcgccctcgcgatcaaccggcgctccgatgccatgttttcggacttg
gcggccctgccgccggccggcgccgtcgatctgatccgtgcggcccccgccccgccgccc
cctcccccgccgccggaggtcgccgccggccggacggaagcgctgcggaagttcctggaa
cccgagatccgcgacgggctggtatcggtgcgggaggatgcccagacgatcggcgtccgg
atcgcgggggacgggatgttctcctccggccgcgccgacgtgcttgagcggttcgagccc
ctgctagcccgcatcggccaggcgctgaacgaccagccgggcgagatcctggtcaccggc
cataccgacagcctgccgatccgctccctgaagttcccgtccaactgggacctctcgctg
gcgcgagcgaaggcggcggccgccctgatcggcggggccatggcggatccgtcgcggctg
acctcggaagggaaagactcgagccagccggtcgcctcgaacgacacggaccaagggcgc
aaactgaaccggcggatcgagctggtcatcctcaaggcccaatga

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