Sphingomonas lacunae: GV829_06315
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Entry
GV829_06315 CDS
T07071
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
slan
Sphingomonas lacunae
Pathway
slan03030
DNA replication
slan03410
Base excision repair
slan03420
Nucleotide excision repair
slan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GV829_06315 (polA)
03410 Base excision repair
GV829_06315 (polA)
03420 Nucleotide excision repair
GV829_06315 (polA)
03440 Homologous recombination
GV829_06315 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slan03032
]
GV829_06315 (polA)
03400 DNA repair and recombination proteins [BR:
slan03400
]
GV829_06315 (polA)
Enzymes [BR:
slan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GV829_06315 (polA)
DNA replication proteins [BR:
slan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GV829_06315 (polA)
DNA repair and recombination proteins [BR:
slan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GV829_06315 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GV829_06315 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
HHH_2
DprA_N
Motif
Other DBs
NCBI-ProteinID:
QJQ32113
UniProt:
A0A6M4ASR3
LinkDB
All DBs
Position
complement(1325348..1328197)
Genome browser
AA seq
949 aa
AA seq
DB search
MARNHLYLVDGSSYIFRAYHRLPPLTNPQGVPVGAVYGYTAMLWKLADGLDKAEGPTHLA
VILDHSSQSFRNSLYDQYKANRPEPPEDLRPQFPLIRDATRAFSLPCIEMEGYEADDLIA
SYTVAAQAAGWDVTIVSSDKDLMQLVTPDPKGDEPHVDMLDTMKNVRMGREAVFEKFGVG
PELVGDVLALMGDSVDNVPGVRGVGPKTATKLIQEYGSLEAALAGAETMKPSKLRDNLIE
HADMARLSRQLVELHRECPLPQPLEELRLDGIPTEPLRDFLLLHGFKSMAARIGGDAPAP
AAGAGPNRAAAMGGGVLGEAWQPKGNGSTAPAAPALPEHPAIDRSRYETVTTLDALDRWI
AEARAIGHVAIDTETDSLDAITGGLVGVSLSTAPGNGCYIPLGHGGHDLLSEKPEQLPMD
VTLARLKPLFADDAVLKIGHNLKYDMAVLAQHGLTITPLDDTLLLSFALDAGQHGHGLDE
LAKLHLEHQCIAFKEVCGTGKSQISFAEVPLDRATEYAAEDAEVALRLWMLLRHRLWQEG
GTKVYEMVDRPLVAAVTAMERRGILVDRETLSRLSGTFSQDMARLEAAIHAEAGGPFTIG
SPKQLGEVLFDKLGLKGGRKGKSGDWSTDQSELERLERDGVPIARMILEWRQVAKLKSTY
SDALQDQINRVTGRVHTSYSLVGAQTGRLSSTDPNLQNIPIRSETGRQIREAFVAAPGNV
LIAADYSQIELRLAAHMADVPQLKAAFAEGADIHSLTAEELFGEVTRDTRAKAKTVNFAI
LYGISRYGLASRMEISNDEAQAIISRYFERFPGISDYMQRTLEGARERGYTETLFGRKTW
FPRINSKNQGERQGAERAAINAPIQGTSADIIKRAMVRMDGALADAGLSSVRMLLQVHDE
LVFEAPEGLVDAAIPVIRRVMSHAAEPAVTLSVPLDVEVGTGANWGAAH
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaatcacctctatctcgtcgacggctccagctacatctttcgcgcctatcac
cggctgccgccgctgaccaacccgcagggggtgccggtcggcgcggtctatggctatacg
gcgatgctgtggaagctggccgacgggctcgacaaggctgaggggccgacgcatctggcc
gtgatcctcgaccacagcagccagtcattccgcaacagcctctacgaccagtacaaggcc
aaccggcccgagccgccagaggatttgcgcccgcaattcccgctgatccgcgatgccacc
cgcgccttttctctgccatgcatcgagatggagggctatgaggccgacgacctgatcgcc
agctacaccgtcgcggcgcaggcggcgggatgggacgtgacgatcgtttcctccgacaag
gatctgatgcagctggtcacgcccgatcccaagggtgacgagccgcatgtcgacatgctc
gacacgatgaagaatgtccgcatgggccgtgaggcggtgttcgagaagttcggcgtcggc
cccgagttggtcggcgatgtgctggcgctgatgggcgacagtgtcgacaatgtgccgggc
gtgcgcggtgtgggaccgaagacggcgaccaagctgattcaggaatatggctcactggaa
gcggcgctggccggggccgagacgatgaagccgtccaagctgcgcgacaatctgatcgag
catgccgacatggcgcgcctgtcccgccagctggtcgagttgcatcgcgaatgtccgctg
ccgcaaccgctcgaggaattgcggctcgacggcatcccgaccgaaccgctgcgcgatttc
ctgttgctgcacgggttcaagagcatggcggcgcggatcggcggcgatgcgcccgctccg
gcggcaggcgcgggtcccaaccgggcggcggcgatgggcggcggagtgctgggtgaggcc
tggcaacccaagggcaatggctctaccgctccggccgcgcctgccctgcccgagcatccg
gcgattgaccgcagccgctatgagacggtgacgacactcgacgcgctcgaccgctggatc
gctgaggcccgggccatcggccatgtcgcgatcgataccgagaccgacagcctcgacgcc
atcaccggcgggttggtcggcgtgtcgctgtccaccgcgccgggcaatggctgttacatc
ccgctcggtcacggcgggcatgacctgctctcagagaagccagagcaattgccgatggac
gtcacgctggcccggttgaagccgctgttcgccgatgatgcggtgctcaagatcggccac
aacctcaaatatgacatggcggtgctggcgcagcatggcctgaccatcacgccgctcgac
gacacgctgctgctgtcctttgcgctcgatgccgggcaacatggccatgggcttgacgaa
ctggccaagctgcaccttgagcatcagtgcatcgccttcaaggaggtatgcgggacgggc
aagtcgcagatcagctttgccgaagtgccattggaccgcgccacggaatatgccgccgag
gatgctgaggtcgcgctaaggctgtggatgttgctgcgccatcggctttggcaggagggc
ggcacgaaagtctatgagatggtcgatcggccgctggtcgccgccgtcaccgcgatggag
cggcgcggcatattggttgaccgggaaacactgtcgcgcctgtccgggacattttcgcag
gacatggcgcggctggaagcggcgatccatgccgaggcgggcggccccttcaccatcggc
agccccaagcaactgggtgaagtgctgttcgacaagctcggcctgaagggagggcgcaag
ggcaagtccggcgactggtccaccgaccagagcgagctcgaacggctcgaacgcgatggc
gtgccgattgcccggatgatcctcgagtggcgtcaggttgccaagctcaaatccacctat
agcgacgccttgcaggaccagatcaaccgggtgaccgggcgtgtccacaccagttacagc
ctggtcggcgcgcaaaccgggcgcctgtcctcaaccgatcccaatttgcagaacataccg
atccgcagcgagacaggtcggcagattcgtgaagcctttgtggcggcgccgggcaatgtc
ctgatcgccgccgactatagccagatcgaactgcgtctggcggcgcacatggccgatgtg
ccgcaactcaaagccgcctttgccgaaggggcggatattcacagcctgacagcggaggaa
ttgttcggcgaggtgacccgcgacacgcgcgccaaggccaagacggtcaatttcgccatc
ctgtatggcatatcccgctatggcctcgccagccggatggagatttcgaacgatgaggcg
caggcgatcatcagccgctatttcgagcgattccccggcatcagcgactatatgcagcgc
acgctcgaaggcgcgcgcgagcgtggctacaccgagacattgttcgggcggaagacctgg
ttcccgcgcatcaacagcaagaatcagggcgagcggcagggggcggagcgcgccgcgatc
aacgcgccgatccaggggaccagcgccgacatcatcaagcgcgcgatggtgcggatggat
ggtgccctggctgatgccggcctgtcatcggtcaggatgctgttgcaggtgcatgacgaa
ctggtgttcgaagcccccgaggggttggtggacgccgccatcccggtgatcaggcgggtg
atgagccacgccgccgaacctgccgtgacgctgagcgtgccgctcgacgtcgaggtggga
acaggcgcgaactggggcgcggcgcactga
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