KEGG   Sphingomonas lacunae: GV829_11385
Entry
GV829_11385       CDS       T07071                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
slan  Sphingomonas lacunae
Brite
KEGG Orthology (KO) [BR:slan00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slan03021]
    GV829_11385 (rpoH)
Transcription machinery [BR:slan03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     GV829_11385 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r3 HTH_11
Other DBs
NCBI-ProteinID: QJQ32970
UniProt: A0A6M4AX61
LinkDB
Position
complement(2377612..2378517)
AA seq 301 aa
MAEGSNVPATMPTLGGEAGLNRYLSEIRKFPMLTPEQEYMLAKRYQQHQDSDAAAQLVTS
HLRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFDPDRGFRLATYAMWWIRASIQEF
ILRSWSLVKLGTTAAQKKLFFNLRRMKNNLAAFEDGDLSPEHVAKIATDLGVTEEEVVSM
NRRMSMGGDASLNVPMREDGEGQWQDLLQDDTVLQDERVADAQERDHRHALLAEAMERLN
DRERDILTRRRLTDEPETLEELSQTYNVSRERVRQIEVRAFEKLQKAMLAIAGERKLLPA
N
NT seq 906 nt   +upstreamnt  +downstreamnt
atggctgaaggcagcaacgtaccggcaacgatgcccacattgggcggtgaggcaggcctc
aaccgttacctgtcggagattcgcaaattcccgatgctcacgcctgagcaggaatatatg
ctggccaaaaggtatcagcagcatcaggattccgatgctgcagcgcaacttgtcacgtcc
cacctgcggctcgttgcaaagattgccatgggctaccgcggctacggcctgccggtcagc
gaacttatttctgaaggcaatatcggcctgatgcagggtgttaagaaatttgaccctgat
cgcggctttcgccttgcgacctatgcgatgtggtggatccgcgcttcaatccaggagttc
atcctccgcagctggagtctcgtcaaacttggcacgacggccgcccagaagaagcttttc
ttcaatcttcgccggatgaaaaataacctcgccgcctttgaggatggcgacttgtcaccc
gaacatgtggcaaagatcgcaaccgacctcggcgtgaccgaggaagaggtggtcagcatg
aaccgccgcatgtcgatgggcggcgatgcctcgctcaacgtcccgatgcgggaggatggc
gaaggccagtggcaagacctgctccaggacgacactgtgcttcaggatgagcgggttgcc
gatgcgcaggagcgtgatcatcgtcatgcgctgttggccgaagcgatggaacggctcaat
gaccgggagcgggacattctcacccgtcgccgtctgaccgacgagccggaaacactcgaa
gagctcagccagacctacaacgtcagccgagagcgggttcgccagattgaggtgcgtgct
tttgaaaagctgcaaaaggcgatgctcgcgatagctggtgagcgcaaacttctgccggca
aattga

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