Streptomyces liliifuscus: JEQ17_23405
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Entry
JEQ17_23405 CDS
T08169
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
slf
Streptomyces liliifuscus
Pathway
slf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
slf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JEQ17_23405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slf03019
]
JEQ17_23405
Enzymes [BR:
slf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
JEQ17_23405
Messenger RNA biogenesis [BR:
slf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
JEQ17_23405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
Bap31_Bap29_C
Motif
Other DBs
NCBI-ProteinID:
QQM42099
UniProt:
A0A7T7I6T8
LinkDB
All DBs
Position
complement(5467921..5469387)
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AA seq
488 aa
AA seq
DB search
MPNANEDNPSALNQVQSRAVSELLRVSPVADELARRFQEAGFSLALVGGSVRDALLGRLG
NDLDFTTDARPEDVLKIMRPWADAVWEVGIAFGTVGGQKDARVGDVDQSFQIEVTTYRSE
AYDRTSRKPEVSYGDSIEEDLVRRDFTVNAMAVALPEKEFIDPHGGLDDLAARVLRTPST
PEASFSDDPLRMMRAARFAAQLDFEVAPDVVAAMKAMAERIEIVSSERVRDELNKLVLSA
HPRKGLTLLVDTGLADRVLPELPALRLERDEHHRHKDVYDHTLIVLEQAMALEENGPDLT
LRLAALLHDIGKPRTRRFETDGRVSFHHHEVVGAKMTKKRMTELKYSNELVKDVSRLVEL
HLRFHGYGTGEWTDSAVRRYVRDAGPLLGRLHKLTRSDCTTRNKRKAAALSRAYDGLEER
IAQLQEQEELDAIRPDLDGNQIMEILGIAPGPAIGQAYKYLLELRLENGPMEYDAAVSAL
KEWWAEQN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaacgccaacgaagacaatcccagtgccctgaatcaggtgcagagccgcgcggtg
agcgaactgctgcgggtgtcccccgtcgccgatgagctcgcccgccgtttccaggaggcc
gggttctccctcgccctggtcggcggctcggtccgggatgccctcctcggccggctcggc
aacgacctggacttcacgaccgacgcccggcccgaggacgtactgaagatcatgcggccc
tgggcggacgccgtatgggaggtcgggatcgccttcggcacggtcggtggtcagaaggac
gcccgcgtcggagacgtcgaccagagcttccagatcgaggtgacgacgtaccgctcggag
gcgtacgaccggacctcgcgcaagcccgaggtctcgtacggcgactctattgaggaagat
ctggtgcgccgtgacttcacggtgaacgcgatggccgtggcgctccccgagaaggagttc
atcgatccgcacggtgggctcgacgatcttgccgcgcgcgttctgcggactccgagcaca
cccgaggcctccttctccgatgacccgctgcggatgatgcgggccgctcggttcgccgcg
cagctcgacttcgaggtggcgccggacgtcgtcgcggcgatgaaggccatggccgagcgc
atcgagatcgtctcctccgagcgcgtgcgtgacgagctgaacaagctggtcctgtccgct
cacccgcggaagggactgacactgctcgtcgacaccgggctcgccgaccgggtgctgccc
gagctgcccgccctgcgcctggagcgggatgagcaccatcggcacaaggatgtctacgac
cacacgctgatcgtcctggagcaggcgatggcgctggaggagaacggtcccgacctcacg
ctgcgcctggccgcactgctgcatgacatcggcaagccgcggacgcgtcgcttcgagacg
gacgggcgggtctccttccaccatcacgaggtggtgggcgccaagatgaccaagaagcgg
atgaccgagctcaagtactccaacgagctcgtgaaggacgtctcgcgtctggtcgagctg
cacctgcgtttccacggctacggcaccggggagtggacggactccgcggtccgccggtac
gtgcgtgacgcgggcccgctcctcggccgtctccacaagctgacccgctcggactgcacg
acgcgtaacaagcgcaaggccgccgccctctcacgcgcgtacgacggcctggaggagcgc
atcgcccagcttcaggagcaggaggagctggacgcgatccggcccgacctcgacgggaac
cagatcatggagatcctgggtatcgcgcccggtccggccatcgggcaggcctacaagtac
ctgctggaactgcgtctggagaacggaccgatggagtacgacgcagcggtgtcggcgctc
aaggagtggtgggccgaacagaactga
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