Spirosoma linguale: Slin_0268
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Entry
Slin_0268 CDS
T01156
Name
(GenBank) Smr protein/MutS2
KO
K07456
DNA mismatch repair protein MutS2
Organism
sli
Spirosoma linguale
Pathway
sli03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Slin_0268
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sli03400
]
Slin_0268
DNA repair and recombination proteins [BR:
sli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Slin_0268
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
RNase_J_C
Motif
Other DBs
NCBI-GeneID:
8723996
NCBI-ProteinID:
ADB36333
UniProt:
D2QDA3
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Position
complement(351334..353751)
Genome browser
AA seq
805 aa
AA seq
DB search
MLYPNTLENKLGFDTIRERLKEACVSPLGQDYVEKIRFTDNVQLIDKLLRQTTEFKQIVQ
YEPDFPTSNYIDVRPHLSRARVEGLALTEAEFFDLKLALRTIQDCLRFLSKREEDNNFPF
LRELAGPVGVDKKLTDALERVVDDRGNIRDSASPELASIRRRIIGEQANLRKRLDSILRQ
ARQNGWIPDDLSLTVRGGRLVIPIAAEHKRKIKGFVHDESQTGQTVFLEPAEVFDANNEI
RELEYEERREIYRILLALTDQIRPHLDDLKKAVNFLAQIDFIRAKAKLAVQLDAIMPKLH
ERPLVNWTNARHPLLYLSFSKQGKTVVPLSVKLDEKARILIISGPNAGGKSVSLKTIGLI
QYMLQCGLLVPMADYAEMGVFQNLFIDIGDEQSLENDLSTYSSHLTAMKQFLIGANKRTL
FLIDEFGTGTEPGLGGAIAESILEDLNKSGAYGVVNTHYTNLKVMADKTPGLINGAMRFD
GEHLEPLYKLEIGQPGSSFAFEIAQKIGLPKGVIDRAKDKLGTQQVNFEKLLKELDIEKR
VFSEKNIEIGINQRKLAQQLAEYTALKERLDNDQKKIVNDAKQKAKALVQEANQRIENTI
REIKENKAERETTKQVRQELERFEQKELKPEPVVLETPKQAEDVFEKDNGVISAGSYVRI
AGQNTIGEVLAIRGKDAEIRIGDLKSNVKLNRLEKVSKKTFAAATEVRDDRPRSQGVDMN
EKMQNFSFNLDIRGKRGEEALGEVDRFFDDALMLGYPELRIVHGKGDGILRTLVRNHLRG
YKQVGKMEDEHADRGGAGVTIVKMK
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcccaataccttagaaaacaagctaggtttcgataccattcgcgaacggctc
aaagaagcctgtgtcagtccactggggcaggactacgttgagaagattcgctttaccgat
aatgtccagctcattgataaactgcttcggcaaacgaccgaattcaagcagatcgttcag
tatgagccggatttcccgacgagcaactacatcgacgttcgcccgcatttgagccgggcc
cgcgtggaaggattagccctgacggaagccgaattctttgacctgaaactcgcccttcgg
accattcaggactgtctgcgcttcttgtccaaacgggaagaggataacaatttccccttt
ctgcgtgagctggccggtccggtcggtgtagacaagaagctgacggacgcgctcgaacgg
gttgtcgacgaccggggtaatatccgcgactcggcttcgcctgaactagccagcatccgt
cggcgtattattggcgaacaggccaatctgcgcaaacggctggacagtattttgcggcag
gcccgtcaaaacggctggattcccgacgacctgtcgctgacggtgcgtggggggcggctc
gtgattccgattgccgctgaacacaaacgaaaaatcaagggatttgtccacgacgaatca
cagaccgggcaaaccgtatttctggaaccggccgaagtatttgacgccaacaacgaaatt
cgagagttggagtacgaagaacggcgcgaaatctaccggattctccttgccctcaccgat
cagattcggccccatctggatgatctcaaaaaagccgtaaactttctggcccaaatcgac
ttcattcgcgccaaggccaaactggcggttcagttggacgccattatgccaaaactgcac
gaacgtccgcttgtaaactggacgaacgcccgccacccgttgctctacctatcgttttca
aaacagggtaaaaccgtggtgccgctgagcgtgaagctggacgaaaaggcccgaatccta
attatttccgggccgaacgccgggggtaaatcggtgtcgttgaaaaccattggactcatt
cagtacatgcttcagtgcggcctgctggtgcctatggccgattatgccgagatgggcgtt
ttccagaatctcttcatcgacatcggcgatgagcaatcgctggagaacgacctaagtacg
tactcttcgcacttaacggcgatgaagcagtttctgatcggtgctaacaagcgtaccctc
tttctgattgacgaattcggaaccggtaccgaaccgggccttgggggcgctattgctgag
tcgattctggaagaccttaataaatcgggggcgtatggggttgttaacacgcactatacg
aacctaaaagtgatggccgataaaacgccgggactcattaacggagctatgcgtttcgat
ggtgaacacctggaaccgctttacaaactggagatcggtcagccgggatcgtcatttgct
tttgaaattgcccagaagatcggccttcccaaaggtgtaatagatcgggctaaagataaa
ctgggcacgcagcaggtcaattttgaaaagttgctgaaagaactggatattgaaaagcgc
gttttttcggagaagaatatcgaaatcggcataaaccagcgtaaactcgcccagcaactt
gccgaatacacagcgctgaaagaacggctggataacgaccagaaaaagatcgttaacgac
gctaaacagaaggcaaaagcccttgttcaggaagcgaatcagcgtattgaaaacaccatc
cgggaaataaaagagaacaaggcagagcgagaaacaaccaaacaggttcgtcaggaactg
gaacggttcgagcaaaaggaactgaaacccgagcctgtcgttctggaaactccgaaacaa
gccgaagatgtattcgagaaagataatggcgtgatctcggcaggaagttatgtacgaatt
gccggacagaatactattggcgaagtactggctatacggggaaaagacgctgaaattcgt
attggcgacctgaagtcgaacgttaagctgaaccggctcgaaaaagtaagcaaaaagacg
ttcgcagccgctaccgaagtgcgcgatgatcgtcctcgtagccagggcgtagatatgaac
gagaagatgcagaacttcagcttcaacctcgacattcggggcaaacgtggcgaagaagcc
ctcggcgaagtggatcgttttttcgatgatgccctcatgctcggttaccctgagctgcgc
atcgttcatggtaaaggcgatggcattctgcgaacgctcgtccgtaatcacctgcgtggc
tacaagcaggtgggcaagatggaggatgaacatgccgaccggggtggtgcgggcgtaaca
attgtaaagatgaaatga
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