Streptomyces liangshanensis: HA039_17130
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Entry
HA039_17130 CDS
T07519
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
slia
Streptomyces liangshanensis
Brite
KEGG Orthology (KO) [BR:
slia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slia03021
]
HA039_17130 (sigM)
Transcription machinery [BR:
slia03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HA039_17130 (sigM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
RWP-RK
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
QIQ03817
UniProt:
A0A6G9H114
LinkDB
All DBs
Position
complement(3973342..3974043)
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AA seq
233 aa
AA seq
DB search
MDDAALGDTNDQDLLAAHVAGDPDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALV
SAFRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRKTSPMEDTERLEQLLEPHESAEA
PAERRDLHRELLAALAKLPADQRSALVLVDMQGYPVAEAARVLGVPTGTVKSRCARGRAR
LLPLLTHLRADTGDNPQPARGRNRTPGTSVPSASAPKDSAPSDPVVKGGGGRA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
ttggacgatgccgcactcggcgacacgaacgaccaggacctcctggcggcacacgtcgca
ggtgaccccgatgccttcggtgagctggtacggcgccaccgtgaccgcctctgggcggtc
gccctgcggaccctgggggaccgcgaggaggccgccgacgccgtccaggacgcgctggtc
tccgccttccgggccgcccacacgttccgcggccagtccgcggtgacgacctggctgcac
cgcatcacggtgaacgcctgcctcgaccgggcccgcaaggccgcctcccgcaagacctcc
cccatggaggacaccgagcggctggagcagctcctcgaaccgcacgagtccgcggaggcg
cccgccgagcggcgggatctccaccgtgagctgctggccgcgctggccaagctccccgcc
gaccagcggtccgccctggtgctggtggacatgcagggataccccgtggcggaggccgca
cgggtgctgggagtgcccaccggcacggtgaagagccgctgcgcccgcggccgggccaga
ctcctccccctcctcacccatctgcgggcggacaccggggataacccccagccggccagg
ggaaggaaccggacgccggggacatccgtcccatcggcatcggcgccgaaggactcagcg
ccgagtgatcctgtagtgaagggcggaggtgggcgcgcgtga
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