Sulfuricaulis limicola: SCL_0116
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Entry
SCL_0116 CDS
T05241
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
slim
Sulfuricaulis limicola
Pathway
slim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCL_0116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slim03400
]
SCL_0116
Enzymes [BR:
slim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCL_0116
DNA repair and recombination proteins [BR:
slim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SCL_0116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
RecG_dom3_C
ResIII
SNF2-rel_dom
IMS_HHH
AAA_30
SecA_DEAD
Cdd1
HHH_5
BAF
DNA_pol_lambd_f
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BAV32440
UniProt:
A0A1B4XCE2
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All DBs
Position
125308..127380
Genome browser
AA seq
690 aa
AA seq
DB search
MDIASLPVTTLKGVGPKLADKLKRLGLQTVQDVLFHLPLRYQDRTRLLRMGSLRPGMEAA
VEGEIELADVVYRGRRSLICRVSDGSGHLHLRFFYFNAIQQQNLARGRRLRLFGEVRFGP
VGLEMIHPEYEFIDGAQAPPAEENLTPVYPTTTGVHQLSLRKLARQALEKHLDKIHEWLP
PAVLQELQLPTLTEALALVHQPPPHTPVELLAEGKHPAVLRLSFEELLAHHLSLRRLRER
VQTEQAPPVAGTGELMQRLLAQLPFQLTQAQQRVLGEILHDLQQSHPMQRLVQGDVGSGK
TIVAACAGLGVIEGGLQVAVMAPTELLADQHLRNFSGWLEPLGLTVVGLSGKLNGRARQD
ALEKIGSGRADIIVGTQALFQEEVEFADLGLIVVDEQHRFGVHQRLALREKGRVGLRRPH
QLIMTATPIPRTLAQSLYADLDVSVIDELPPGRKPIETVALPSARRADVVSRIRDACTAG
RQAYWVCPLIEESETLELETATDTAQALREALPDLSIALIHGRMKPLEKEKIMAAFKRGE
VHLLVATTVIEVGVDVPNASLMVIENAERLGLSQLHQLRGRVGRGAAESHCVLLYQPPLS
EMARARLAALRETSDGFEIARRDLEMRGPGEMLGTRQAGMPQFHIADLLRDRAWLPRVQQ
VAELLLKEHPQCVDPIVRRWISGAETYGSV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgcctcgctgccggtaacgaccctcaagggcgtcgggcccaagctcgcggac
aagctcaagcggctcggcctgcaaaccgtgcaggacgtcctgttccatctgccgctgcgc
taccaggatcgtacccgtctgttgcgcatgggcagcctgcggcccggcatggaggccgcg
gtcgagggcgagatcgagctggcggacgtggtctatcgcggccggcgcagcctgatctgc
cgcgtcagcgacggctccggtcatctgcatctgcggtttttctatttcaacgccatccag
cagcagaatctcgcgcgcggccggcgcctgcggctgttcggcgaggtgcgcttcggcccg
gtcgggctggagatgatccatcccgagtacgaattcatcgacggcgcgcaggcaccgccg
gccgaggaaaacctgacgccggtttatccgacgaccacgggcgtgcaccagctgagcctg
cgcaagctggcgcgccaggcgctggaaaagcatctcgacaagatccacgaatggctgccg
cccgccgtgttgcaggaactgcaactgccgacgctcaccgaggcgctggcgctggtgcat
cagccgccgccgcacacgccggtggaactgctggcggaaggcaagcatcccgcggtgctg
cgcctgtcgttcgaggaactgctggcgcatcacctgagcctgcggcgcctgcgcgagcga
gtgcaaacggaacaggcgccgcccgtggcgggcacgggtgaactcatgcaacgcctgctg
gcgcagctgccgtttcagttgacgcaggcccagcagcgcgtgctcggcgagattctgcat
gatttgcagcagagccatcccatgcagcgcctggtgcagggtgacgtcggttccggcaag
accatcgttgccgcctgcgccggcctcggtgtcatcgaaggcgggctgcaggtggccgtc
atggcgccgaccgagctgctggccgaccagcatctgcgcaatttttccggctggctggag
ccgctcggcctcaccgtggtcgggctgtccggcaagctcaacggccgcgcgcgccaggac
gcgctcgaaaaaatcggctcgggccgggccgacataatagtaggcacgcaggcactgttt
caggaggaagtggaattcgccgatctgggattgatcgtggtggacgagcagcaccgcttc
ggcgtgcaccagcggctggcgctgcgcgagaagggccgcgtgggcctgcgccggccgcat
cagctgatcatgaccgccacacccatcccgcgcacgctggcgcaaagcctgtacgccgat
ctggacgtgtcggtgatcgatgagctgccaccgggacgcaagccgatcgagacggtggcg
ctgccttcggcgcgccgtgccgacgtggtcagccgcatccgcgacgcctgcacggcgggc
cgacaggcctattgggtctgcccgttgattgaagagtctgagaccctggagctcgagacg
gcaacggacacggcgcaggccttgcgcgaagccttgcccgatttgtcgattgcgctgatc
catgggcgcatgaagccgctggaaaaggaaaagatcatggcggcgttcaagcgcggtgag
gtgcatctgctggtggccaccaccgtcatcgaggtcggcgtggacgtgcccaacgcctcg
ctcatggtcatcgagaacgccgagcggctgggcctgtcgcaattgcaccagctgcgcggg
cgcgtcggccgcggcgcggcggaaagccactgcgtgctgctgtaccagccgccgctgtcg
gagatggcgcgggcgcggctggcagcgctgcgcgagaccagcgacggtttcgagatcgcg
cggcgcgacctggagatgcgcggtccgggcgagatgctcggcacgcgccaggccggcatg
ccgcagtttcatatcgccgatcttttgcgcgaccgcgcatggctgccgcgcgtgcagcag
gtggcggaactgctgctcaaggagcatccgcaatgcgtggacccgatcgtgcggcgctgg
atcagcggcgccgagacctatggcagcgtttga
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