Shewanella litorisediminis: JQC75_01405
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Entry
JQC75_01405 CDS
T07182
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
slit
Shewanella litorisediminis
Brite
KEGG Orthology (KO) [BR:
slit00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
slit02000
]
JQC75_01405
Transporters [BR:
slit02000
]
Other transporters
Pores ion channels [TC:
1
]
JQC75_01405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
QRH02116
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All DBs
Position
292334..295264
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AA seq
976 aa
AA seq
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MFKLKPSVLTLALAAAGLPLAMLHSAAFAAEPQQSEPTQTAEATEKETDNQAKLNPDDVE
RIEVTGYRRSLIDSLNAKRFGDTVSEQLSADDLGALPDVSMADALTRLPGISAVRTGGQA
AEINIRGMSGGFVFSTLNGREQVSTSGSRSIEFDQYPSELINSAAVYKSPKASLIEGGLA
GTVELATASPLAADKEQNVTVNARGMYNDRASEVYGAEEFGHRLSFSYQGKFLDETLGVA
LGYARLEQPSVATQFIGLAYSDNKDVDGLADDTNGPEANPANEYISEGFEMQHLGGVEVR
NGYMGAIEWAPVSNFKLKADAFLSRFDSEAFARGFRVKLGGPTTAVANPVLDGNSVIGGT
FNRTSQSYTRVELVNDDNQDFDQVNSFGVNADWQITDRLNVAADVSYSSAKSDFRNGLLW
SNVAVDANADKPLFDENVSISYLLNGLDLPDLGFNQADAFSDINRVMVSKYGIYPYENED
EVKAYRLDFKYDLDSDWLASVEFGVRWSDRTYSNDRSVFEYGNDGGFSSTEPPLRLTQDM
VTVVDWSGDFSYFPSYLAIDLDKALNAWFPEGIPQPVQTWGNADGVLDPMGYTTNYSWSV
LQSGEVYEKVLASYLMFNIDTEIGGLPLTGNIGLRVVDTDQSATMLQNVGGDPAQGAQYI
VDENGIVNDLYAPTVVGVTYTDYLPSMNLSLKLTDDSQLRFAAAKVMSRPPINRLAGDVS
ASVNDDGEINGSSTNNPFLMPFYATQYDLSYEYYFEEGALVAALFYKDIDSFIDTVAIAD
FDFRGHGFNVPDYIVDPDSGEQKATTNGTYTTAVNNTEGGYIRGLELAYTQVFASLPSPF
DGLGMNTSYSYTDSEVQKLTSLGGDSVPQTLEGLSKHVANLTLFYGYEGFETRISARYRS
SFVSEQVAINSQVVNYDAETVIDYQASYQINDNLGVLFQVNNLTDEPTKSYFGTEAKTGT
LQYFGRQFFLGVTYAM
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagctcaaacccagtgtcctgactctggcgttggcggctgccggtttgcctttg
gccatgctgcattcagcggcatttgccgccgagccgcagcagagcgagccaacgcaaacc
gctgaagccacagagaaagagacagacaatcaggccaaactcaatccggacgatgtggaa
cgcatcgaagtcacgggttaccgccgcagtcttatcgactcactcaatgccaagcgcttt
ggcgataccgtttccgagcagctgtctgccgatgacctgggcgccttgcccgatgtgtcc
atggccgacgccctcacgcgcctgccggggatctcggcggtgcgcaccggtggccaggca
gcagaaatcaatatccgcgggatgtccggcggttttgtgttttccaccctcaatggccgt
gagcaggtgtccaccagtggctcacgcagcatcgaattcgaccaatacccttctgagctc
atcaactcggcagccgtgtacaagtcgccaaaagcatcgctgattgaaggcggtctggcc
ggtactgtggagctggccaccgccagccctctggctgctgacaaggagcagaatgtcact
gtgaatgcccgtggcatgtacaacgacagggccagcgaagtgtatggtgccgaggagttt
ggccacagactgagtttttcctatcagggcaagttcctcgatgaaaccctgggcgtggca
ctgggttatgcccggctcgagcagcccagcgtagccacccagtttattggtctggcctac
agcgacaacaaggatgtggacggcctggccgatgacaccaatggccctgaggccaatccc
gccaacgagtacatcagcgaaggcttcgagatgcagcatcttggcggcgttgaggtgcgc
aacggctatatgggcgccatcgagtgggcgccggtcagtaacttcaaactcaaagccgat
gccttcctgtcgcgctttgacagcgaagcctttgcccgtggtttccgggtgaaactcggt
ggccccaccaccgccgtggccaatcccgtgctggatggcaactcagtgataggcggcacc
tttaaccgcacgtcccaaagttacacccgggtggaactggtgaacgatgacaaccaggac
ttcgaccaggtcaacagctttggggtgaacgccgactggcagataaccgaccgcctgaat
gtggcggcggacgtgtcttattcctccgccaagagcgatttccgtaacggccttttgtgg
tcaaacgtggccgtggatgccaatgccgacaagccgttgttcgatgaaaacgtctccatc
agctacctgctcaatgggctggacctgccggatctcggcttcaatcaggccgatgccttc
tcggacatcaatagggtgatggtgagtaaatacggcatctatccctatgaaaacgaagat
gaagtaaaagcctatcgtctggacttcaagtacgatctagacagtgactggctggcgtcg
gtggagtttggcgtgcgttggtccgaccgaacctacagcaacgaccgctcggtgtttgag
tatggcaacgacggcggcttctccagcaccgagccgccactgcgactgacccaggatatg
gtgacagtggtggattggagcggcgacttcagctacttcccctcttatctggccatcgac
ctcgacaaggcgctcaacgcctggttcccagagggtatccctcagccggtgcaaacctgg
ggtaatgccgatggggtgctcgaccccatgggttacaccaccaactattcctggtctgta
ctgcaaagcggcgaagtgtatgaaaaggtgctggccagctacctgatgttcaacatagac
accgaaatcggtggcttgccgctgaccggtaacataggtctgcgcgtggtggatacggat
cagtcggccaccatgctgcaaaacgtgggcggcgatccggcccagggtgcccagtacatt
gtcgatgaaaacggcatagtcaacgacctctatgccccaacagtcgtgggagtgacctat
accgactatctgccatccatgaacctgagcctcaagctcaccgacgacagccagctgcgt
tttgcggcggccaaggtcatgtcgcggccacccatcaaccgcctggcgggggatgtcagt
gcctcggttaacgatgatggcgagattaacggctccagtaccaataaccccttcctgatg
cccttctacgccacccagtatgatctgtcttacgagtactacttcgaagagggcgcgttg
gtggcggcgctgttttacaaggacatcgactcctttatcgacactgtggctatcgccgac
tttgacttccgcggccacggcttcaacgtgcccgattacatagtggatcccgacagcggt
gagcagaaagccaccaccaacggcacctacaccacggcggtcaacaacaccgaaggcggc
tatatccgcggtctggaactggcctacacccaggtgtttgcgtcactgcccagccccttc
gatggcctggggatgaacaccagctactcctacaccgacagtgaggtgcagaaactcacc
agtctggggggcgacagtgtgcctcagactctggaaggactgtcgaagcacgttgccaac
ctgaccctgttctatggctacgagggttttgaaacccgtatcagcgcccgttatcgctcg
tccttcgtgtctgagcaggtggccattaacagtcaggtagtgaattacgatgccgaaacc
gtgattgactatcaggcctcctatcagattaacgacaatctcggggtgctgttccaggtc
aacaacctcaccgacgagcccaccaagagctacttcggcaccgaggccaaaacaggcacc
ctgcagtatttcggccgccaattcttcctgggggtgacctatgccatgtaa
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