Shewanella livingstonensis: EGC82_14210
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Entry
EGC82_14210 CDS
T05875
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGC82_14210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_14210
Enzymes [BR:
slj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EGC82_14210
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EGC82_14210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
FTSW_RODA_SPOVE
Motif
Other DBs
NCBI-ProteinID:
AZG73806
UniProt:
A0A3G8LVX1
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All DBs
Position
3283501..3284307
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AA seq
268 aa
AA seq
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MKIVSFNINGIRARLHQLQALIDSHSPDIIGLQETKVHDEAFPVADVEAMGYKVHYHGGK
AHYGVAMLSKADPVEVIKGFETDGADAQRRLIIGKFTQPNGRILTVFNGYFPQGESIHHE
TKYPAKRKYYQDLMLHLDKHHNPSDDIAIIGDINISPTDLDIGIGEVNAKRWLKSGKCSF
QPEEREWLARLQQWGFIDSFRQLHPNRTERYSWFDYRSKGFDDNRGLRIDVILVTESMLP
RLIESDVDYELRAIEKPSDHAPIWTTFS
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtttcttttaatataaatggcatacgagctcgcttgcatcaactgcaagcg
ctcattgacagccattcaccagacattattggcttgcaagaaaccaaagtgcatgacgaa
gcgtttccagttgctgatgtagaagctatgggttacaaagttcattaccatggcggcaaa
gcacattacggtgtggcgatgctatctaaggctgaccctgtcgaagtcattaaaggtttt
gaaactgatggtgcagatgcccaacgtcgtttgattattggtaagttcacccagcctaat
ggtcgcatattgaccgtatttaatggctactttccacagggtgaaagtattcatcacgaa
actaaatatccggctaagcgtaagtattatcaagacttaatgctacatttagacaagcat
cataatccaagtgatgacattgcaattattggcgatattaatatttcaccaaccgactta
gacatcggtattggtgaggtaaacgccaaacgttggttaaaaagcggtaaatgtagcttt
cagccagaagaacgtgagtggttagcacgtttacaacaatggggctttattgacagtttc
cgtcaattacacccaaatagaactgaacgttactcatggtttgattaccgtagcaagggc
tttgatgataaccgtggcctacgaatagacgttattctggtgacagaatcaatgttgcct
cgcttaattgaatcagatgttgattatgagttacgtgctattgagaaaccatctgatcat
gcgccaatctggactacgtttagctaa
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