Shewanella livingstonensis: EGC82_15020
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Entry
EGC82_15020 CDS
T05875
Symbol
truC
Name
(GenBank) tRNA pseudouridine(65) synthase TruC
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slj03016
]
EGC82_15020 (truC)
Enzymes [BR:
slj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
EGC82_15020 (truC)
Transfer RNA biogenesis [BR:
slj03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
EGC82_15020 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AZG73953
UniProt:
A0A3G8LVY5
LinkDB
All DBs
Position
complement(3490209..3491090)
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AA seq
293 aa
AA seq
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MISKDNDVEYSLDNDDLFESISSDDINDSHAADTDLDDDLQPPHIDILFEDEHIVAIHKP
AGLLVHRSYLARRERFFAMQMTRDLVGCHVFPVHRLDRPTSGVLLFAKSSEVARLLCEQF
ADHSIKKHYLAIVRGNMHESGTLDYALKQEFDDLGDKHVDPNKAAQEAVTDYQPLLNTDI
PFSSGRYPSSRYGLVRLSPQTGRKHQLRRHMAHLRHPIVGDTTHGDGKQNKFFREHFNIN
RLWLIAKSLQFMHPVTQQPMHIETELESQWLDIFTEFGWDDDQLSSMPSMLLS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgatctcaaaagataacgatgttgaatactcattggataatgatgacttatttgagtcc
ataagctcagatgacatcaatgattctcatgctgcagacactgatttagatgatgactta
cagcctcctcatatcgatatattatttgaagatgagcatattgttgcaatacataagcct
gcgggtttattagtccaccgcagttatcttgctcgaagagagcgtttttttgcaatgcaa
atgacccgggatttggtgggttgccatgtttttccagtgcatcgtcttgatagaccgaca
tctggcgtattgctgtttgctaaatccagtgaggtggctcggttgttatgtgaacaattt
gccgatcacagcattaaaaaacactatctagcgattgttcgtggaaatatgcacgagtcg
ggcacgttagattatgcgcttaaacaggagtttgatgatttgggcgataagcatgttgat
cccaataaagcggcacaagaagctgtgacagattatcaaccgttactaaataccgacatc
ccgtttagttctggccgttatccttctagccgttatggattggtaagactaagccctcaa
actggtcgcaagcatcagttacgtcgtcatatggcgcacttacgtcatccaatagtgggt
gacacaacccatggtgatggtaaacaaaataagtttttccgtgaacatttcaatattaat
cggttgtggttaatcgcaaaaagtctgcagttcatgcatccggtaacacaacagcctatg
catatagaaactgaactcgagtcacagtggttagatattttcactgaatttggttgggat
gatgatcaattatcatccatgccaagtatgttactaagctaa
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