Salipaludibacillus sp. LMS25: MM221_08880
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Entry
MM221_08880 CDS
T08296
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
slms
Salipaludibacillus sp. LMS25
Pathway
slms03030
DNA replication
slms03430
Mismatch repair
slms03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slms00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MM221_08880 (dnaX)
03430 Mismatch repair
MM221_08880 (dnaX)
03440 Homologous recombination
MM221_08880 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slms03032
]
MM221_08880 (dnaX)
03400 DNA repair and recombination proteins [BR:
slms03400
]
MM221_08880 (dnaX)
Enzymes [BR:
slms01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MM221_08880 (dnaX)
DNA replication proteins [BR:
slms03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MM221_08880 (dnaX)
DNA repair and recombination proteins [BR:
slms03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MM221_08880 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
PIF1
AAA_assoc_2
TIP49
AAA_5
DnaX_C
AAA_22
AAA_19
DNA_pol3_a_NII
AAA_16
DnaA_N
AAA_7
Mg_chelatase
Rad17
AAA_2
AAA_18
DUF815
AAA_24
AAA_14
DUF1186
Glyco_transf_10
Sigma54_activat
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
UTR16620
LinkDB
All DBs
Position
1937940..1939661
Genome browser
AA seq
573 aa
AA seq
DB search
MSYQALYRVWRPTQLADVVGQEHITKTLKNALLQEKLSHAYLFTGPRGTGKTSAAKIISK
SINCEKAPVDEPCNTCTICKGIQDGSIVDVMEIDAASNNGVDEIRDIRDKVKFAPSAARY
KVYIIDEVHMLSTGAFNALLKTLEEPPPHVIFILATTEPHKIPLTIISRCQRFDFKRISA
HAMLKRMEEILERSDVQVNEDALALIARASEGGMRDALSLLDQAISYADETVTQEDVLSI
IGAVSQQLLHRVIEAVYSGDVAAGLQAVDKLMKEGKDPNRFVEDLIFFLRDVLMVKAAPD
LDESKDRLTGDDAFKQAVESLDIQWIYHMVESLNHFQQQMKWASHPQVFLEILIVQSAQK
NKGLSSAGPIVEDETINTLKSKINELEASVKHLQKGSTSTSANGSTSGEVSKPKPKPVPN
SAKSREHVKKVKGMLHKATKQYLHTIHSSWGQVIEQVKQKSVPASAWLNDCKPVACSDDQ
FVLAFRNEMHRDMVDEKFRELVEEAAAVVTQHHMAMLTILEPHWEEVKAAYVREQKVDGN
EETSASSESKEEANPVIDEAVKLVGRDLLEIKD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaagcattatatcgtgtgtggcgccctacacaattggcagatgtcgttggt
caggaacatatcacgaaaacattgaaaaatgccttactccaggaaaagctctcacacgcc
tatctgtttacaggcccgcgtggaacaggaaagacaagcgcggccaaaattatttctaaa
tcaataaattgtgaaaaagcgcctgttgatgaaccatgcaatacatgcactatttgtaaa
ggaatccaagacggtagtattgtagacgtcatggaaattgacgctgctagtaataacgga
gtcgatgaaattcgcgatattagggataaagtgaaatttgcgcctagtgcggctcgttac
aaagtttatattattgatgaagtgcatatgctgtctacgggggcttttaacgcattattg
aaaacgttagaagagccaccaccacatgtcatctttattcttgctactacagaaccgcat
aaaatcccgcttacgattatctctaggtgtcagcgctttgatttcaagcgaatatcagct
catgccatgttaaagagaatggaggaaattttagaaaggtcggacgttcaggttaatgag
gatgcactcgctctaatagctagagcatctgaaggaggcatgagggacgctttaagttta
ttagatcaggctatttcctatgctgatgagacggtgacacaagaagatgtcttatccatt
atcggtgctgtttcccagcagttattacatcgcgttatcgaagctgtttatagtggtgac
gttgcagctggtctccaagcagtggataagttaatgaaagaaggaaaagaccctaaccgc
tttgttgaagaccttattttctttttgcgagatgtcttaatggtaaaagctgccccagac
ttggatgaatctaaggataggcttactggagatgatgcgtttaaacaagcggtggagagt
ctggatatacaatggatttatcacatggtggaaagccttaaccattttcaacagcaaatg
aaatgggctagtcatccacaagtattcttagaaattctcatcgtccagtcggctcaaaaa
aacaaagggttatcaagtgccggacctatcgttgaggacgagacaattaatacattaaag
tctaaaattaacgaactggaagctagcgtcaaacatctccaaaagggtagcacttctacc
tctgctaacggaagcacttctggagaagtgtcaaaaccgaagccaaaacctgtccctaat
agtgctaaaagtagggagcatgttaaaaaagtaaaaggaatgttacacaaggcaactaaa
cagtacttacacacaattcacagtagttggggccaagtcattgaacaggtgaaacaaaaa
agtgttccagcttcagcttggttgaacgactgtaaacctgtggcctgctctgacgatcaa
tttgtgcttgctttccgaaacgagatgcatcgtgatatggtggatgaaaaatttcgggaa
ctagtagaggaagcggccgctgtagtgacacaacaccacatggcgatgcttacaattctt
gaacctcattgggaagaagtaaaagctgcttatgttagagagcagaaagtggatggcaat
gaagagacatccgcgtcatctgagagtaaggaagaagcaaaccctgttatcgatgaagct
gttaaattagtcggccgagatttactggaaataaaagattag
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