Shewanella loihica: Shew_0593
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Entry
Shew_0593 CDS
T00489
Name
(GenBank) ABC transporter-related protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
slo
Shewanella loihica
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
slo03012
]
Shew_0593
Translation factors [BR:
slo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
Shew_0593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
RsgA_GTPase
MMR_HSR1
AAA_18
ABC_tran_CTD
ATP-synt_ab
KAP_NTPase
AAA_22
AAA_16
MeaB
Thymidylate_kin
AAA_23
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABO22465
UniProt:
A3QAG7
LinkDB
All DBs
Position
complement(669986..671896)
Genome browser
AA seq
636 aa
AA seq
DB search
MITITQAQLIRGSKTLLDEASLTVYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEISV
PTGWQIATVAQETPALEVSALEYVIDGDREYRELEEALHKAQLEDNGHQIALLHGKIDAI
GGYSIRARAASLLAGLGFSEAEQQNPVKSFSGGWRMRLNLAQALLCRSELLLLDEPTNHL
DLDTMYWLESWIKAYQGTLILISHDRDFIDAIVDEIVHVEHHKLNYYKGNYTAFERIRAE
RMAQQQVAYERQQKERAHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSKADSPFYM
AFRAPEALPNPLVKMEQVSVGYGDKAILNHVHLNLVPGARIGLLGRNGAGKSTLIKLLAE
QLKPMSGLYEPNPGLNIGYFAQHQLEFLRLDESPLQHLTRLAPNNREQELRDFLGGYGFN
GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQDFEGAM
IIVSHDRHLLRLSCSDYYLVDGGEVKSFDGDLDDYHQWLLDAAKEANKPAAQDDATPAQD
KKLQKRLEAELRQKLSPLKKAQAKLEKIQQDCSDKLAELENLLADTSLYEADNKARLTQI
LAERTQHTQQLEESEMEWLELQENIEAIEQEAKLQS
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccattacccaagcgcaacttattcgcggctccaagaccctattggatgaagcc
tctctgactgtctaccccggccacaaggtcggcctggtgggtgccaacggcacgggcaag
tcatctctgcttgcgttgatcatgggacacctcagcctggataagggtgagattagcgtg
cccacgggctggcagatcgccacagttgcccaggagaccccggcgcttgaggtgagcgcg
ctggaatatgtgatcgacggcgaccgcgaatatcgcgagctggaagaagcgctgcacaag
gcgcagctagaagataacggtcaccagatcgccctgctgcatggcaagatagacgccatc
ggcggctacagcatccgcgcccgcgccgccagcctgttggccggcctaggctttagtgag
gccgagcagcaaaatccggtgaagagcttctcggggggatggcgcatgcgtctcaacctg
gcccaggcgctgctttgccgctccgaactcctgctactggacgaacccaccaaccacctc
gacttggacaccatgtactggctagagagctggatcaaggcctatcagggcacgctgatc
ctcatcagccacgacagggactttatcgacgccatcgtcgacgagatagtgcatgtcgag
caccataagctcaactactacaagggcaactacaccgccttcgaacgcatccgcgccgag
cgtatggcccagcaacaggtggcctatgagcgccaacagaaagagcgcgcccacatgcaa
tctttcgtcgaccgcttccgctacaaggccagcaaggccaagcaggcccagagccgtctc
aaggcgctggagcggatgactgagctgctgccctccaaggccgacagccccttctacatg
gcgtttcgcgcccccgaggccctgcccaacccgctggtgaagatggagcaggtctccgtc
ggctatggcgacaaggcgatcctcaaccatgtgcatttgaatctggtacccggtgcccgc
atcggtctactggggcgtaacggcgcgggtaagtcgacgcttattaagctgctggccgaa
cagctcaagcccatgagcggcctgtatgagccaaatcccggcctcaatatcggttacttc
gcccagcatcagctggagtttttgcgcctggatgaatcgccgctgcaacacctgacgcga
ctcgccccaaacaaccgggagcaggagctgagggacttcctcggcggctatggctttaac
ggcgacatggccctgtctccggttcgccccttctccggcggcgaaaaggcccgtctggtg
ctggcgctgctggtgtggcaacgccctaacctgttgctgctcgatgagcccaccaaccac
ctggatctcgagatgcgtcacgccctgaccatggcgctgcaggacttcgaaggtgccatg
atcatcgtatcccacgatagacacctgctgcgcctgagctgtagcgactactacctggtg
gatggcggcgaggtgaagagcttcgacggcgatctcgacgactatcatcagtggctgctg
gacgctgccaaggaggctaacaaacctgccgcccaggatgatgcgacaccagcccaggat
aagaagctgcagaaacgattggaagcggagctgagacagaagctgtcaccgctgaagaag
gctcaggccaagcttgagaagatccaacaagattgcagcgacaagctggccgagctggaa
aacctgctggccgacaccagcctgtatgaggccgataacaaggccaggctcacccagatc
ctggccgagcgaacccagcatactcaacagcttgaagagagcgagatggagtggctggag
ctgcaagagaacatagaggccatagagcaagaggccaagctgcagagctaa
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