KEGG   Shewanella loihica: Shew_1442
Entry
Shew_1442         CDS       T00489                                 
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
slo  Shewanella loihica
Pathway
slo02020  Two-component system
Brite
KEGG Orthology (KO) [BR:slo00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Shew_1442
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:slo02022]
    Shew_1442
Two-component system [BR:slo02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   Shew_1442
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 HTH_50 AAA_16 AAA_3 Mg_chelatase AAA AAA_7 ATPase
Other DBs
NCBI-ProteinID: ABO23309
UniProt: A3QCW1
LinkDB
Position
complement(1657319..1658686)
AA seq 455 aa
MQNQVFNQYDILIVDDEPLIGSALVQLFELESYRALALTDAKQIGLGLPDNWPGIVISDV
NMPDIDGLSLMRTLLAQDKDIPIILLTGHGDIAMAVQALKQGAYDFIEKPFNNEHMLDIA
KRALEKRALTLENRSLKRELESQSTPGPRILGHSPGIKQMRHIIHQVIDMPADVLIEGET
GTGKELVARYLHDHSPRAEANFVAINCGAIPETIIESELFGAESGAFTGADKTRIGKFEY
ANGGTLFLDEIESTPLSLQVKLLRVLEDRKVERLGSNKSIDLDIRIIAATKVDLKSLCDT
GEFRQDLLYRLNLVTVPIPALRERREDIGLLFLHFARVASARYHKALIPLTAEYTAQLVS
HDWPGNVRELRNLAERYVLLGPEAAFATSLGQSSQLNANMSLQQRVEFFERLLIEEALSN
NKGSIKLTMEQLELPRKTLYDKMQKFGLNRKTFIN
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgcaaaatcaagtttttaatcaatacgacatcttaatcgtcgacgacgagcccctgata
ggctcggccctggtgcagctgtttgaactcgaatcctaccgcgccctggccctcaccgac
gccaagcagattggcctgggcctgcccgacaactggccgggcatagtgatctcagacgtc
aacatgccagatatcgacggcctatcgctgatgcgcaccctgctggctcaagacaaggat
attcccataatcctgctgaccggccacggtgatatcgccatggcggtgcaggcactgaaa
cagggggcctatgattttatcgagaagccctttaacaacgaacacatgctggatatcgcc
aagcgcgcgctggagaaacgcgccctgaccctggaaaaccgcagcctgaaacgtgagcta
gaatcccagagcaccccagggccgcgcattctgggtcacagcccggggatcaagcagatg
cgccacatcatccatcaggtgatcgatatgcccgccgatgttttaattgaaggcgagaca
ggcacgggcaaggagctggtcgcccgctatctgcacgaccacagccctcgagcagaggcc
aacttcgtcgccatcaactgcggcgccatcccagagaccatcatagagagcgagctgttt
ggcgccgaatctggcgccttcaccggcgccgataagacacgtatcggcaagttcgagtat
gccaacggcggcaccctgtttctcgacgagattgagagcacgccgctatccttgcaggtt
aaattgctcagggtattggaagacaggaaggtggagcgcctcggctccaacaagagcata
gacttagatattcgcatcattgccgccactaaggtggatctcaagagtctgtgcgacacg
ggcgagtttcgccaggatctcctctatcgcctcaatctggtgactgtgccgattccggct
ctcagggagcggcgcgaagatatcggcctgctgtttctgcatttcgcccgggtcgcctcg
gcccgctatcacaaggccttgatccccctgacggccgaatacacggcccagctggtctcc
cacgactggcccggcaatgtaagagagctacgaaacctggccgagcgttatgtgctctta
ggtccagaggcggcctttgccacctcactgggacagagcagtcaactcaacgccaacatg
tcgctgcagcagcgggtggagtttttcgagcggctgctgatcgaagaggcactgagcaac
aacaagggcagcatcaagctcaccatggagcagctagagctgcctcgcaagaccctctat
gacaagatgcagaagttcggcctcaaccgtaagaccttcatcaactaa

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