Shewanella loihica: Shew_2133
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Entry
Shew_2133 CDS
T00489
Definition
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
slo
Shewanella loihica
Pathway
slo00473
D-Alanine metabolism
slo00550
Peptidoglycan biosynthesis
slo01100
Metabolic pathways
slo01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00473 D-Alanine metabolism
Shew_2133
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Shew_2133
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Shew_2133
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slo01011
]
Shew_2133
Enzymes [BR:
slo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Shew_2133
Peptidoglycan biosynthesis and degradation proteins [BR:
slo01011
]
Precursor biosynthesis
Amino acid ligase
Shew_2133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
ABO23999
UniProt:
A3QEV1
LinkDB
All DBs
Position
2479110..2480114
Genome map
AA seq
334 aa
AA seq
DB search
MNPINLLLLCGGGGDEHAISLLSANYFETSLAKLPHLNVLRVELDAKGQYQSKSGERCEL
TNRREIRFEDESLAPWPVDYVIPCIHGYPGETGDIQSYFELINLPYFGCDAEGSRNCFNK
ITAKMWFSALGIPNTPYLFLNQLDEQAIAQTTDALAKWGSVFVKAASQGSSVGCYRVDDA
AQIPAILADAFHYSPYVVVEKTIQARELEVAVYQYRGETVATLPGEVICAGGTFYTYDEK
YAADSKATTKVVAEVSDEIAQQIRAYAVKVFDGMKLRHLSRIDFFLTPEGEILLNEINTF
PGLTPISMFPKMLANHGDDFSQYLNEAILTGLNR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgatcaaccttttacttttatgcggtggcggcggcgatgaacacgccatctcc
ctgctgtcggccaactacttcgagacctcgctggcgaaacttccccacctgaatgtgctg
cgggtcgaactcgatgccaagggacaatatcaaagcaaatcaggtgagcgctgtgagctg
accaatcgccgcgagatccgtttcgaagacgaaagcctggcgccctggccggtggattat
gtgatcccctgtattcacggctaccctggcgaaaccggcgacattcagtcctatttcgaa
ctcataaacctaccctatttcggctgtgacgccgagggctctcgcaactgtttcaacaag
atcaccgccaagatgtggtttagcgccctggggatccctaacaccccttacctcttcctg
aatcaactggacgagcaggcaattgcccagaccacagacgccctggccaagtggggctca
gtattcgtaaaggccgcctcacaaggctcctctgtgggctgttaccgggtcgatgacgcg
gcgcagatcccggccattctggccgatgcgtttcattattcgccctatgtggtggtagag
aaaaccattcaggcacgggagctggaagtcgccgtctatcaataccgaggcgagacggtc
gccaccctgcctggcgaggtgatctgcgccggtggcaccttctacacctatgatgagaag
tatgccgccgacagcaaggccaccactaaggtcgtggccgaagtcagcgatgagatagcc
cagcagatccgcgcctatgcggtaaaggtattcgatggcatgaagcttagacacctgtcg
cgcatcgatttcttcctcacgccagaaggcgagatcttactcaacgagatcaacaccttc
cccggcctgacgccgatttctatgttccctaagatgctggccaaccatggcgatgacttt
agccaatacctgaacgaagccattctgaccgggcttaatcgctaa
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