Shewanella loihica: Shew_2215
Help
Entry
Shew_2215 CDS
T00489
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
slo
Shewanella loihica
Pathway
slo00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Shew_2215
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
slo01007
]
Shew_2215
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slo03016
]
Shew_2215
Enzymes [BR:
slo01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Shew_2215
Amino acid related enzymes [BR:
slo01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Shew_2215
Transfer RNA biogenesis [BR:
slo03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Shew_2215
Prokaryotic type
Shew_2215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
tRNA_bind
B5
Motif
Other DBs
NCBI-ProteinID:
ABO24081
UniProt:
A3QF33
LinkDB
All DBs
Position
complement(2583594..2585981)
Genome browser
AA seq
795 aa
AA seq
DB search
MKFSESWLREWVNPSISRDDLSHQITMAGLEVDGVDPVAGDFSGVIVGEVVECGQHPDAD
KLRVTKINVGQDELIDIVCGAPNCRLGLKVAVAMVGAVLPGDFKIKKAKLRGQPSFGMLC
SYGELGIDIESDGIIELPLDAPIGQDVREYLDLNDVVIDVDLTANRADCLGMVGLAREVG
VLNRQAVVAPTWEAVTPSIEDAIEIDNQAPSACPRYLGRVVKNVNVKAQSPLWMQEKLRR
SGIRSIDPIVDITNYVLIEFGQPMHAFDLAKIDGKIQIRLGDGEEKLTLLDGNEITVPND
TLVIADNSQPLALAGVFGGEYSGVTGETQDILLECAFFAPLAIMGKSRRLGLHTDSSHRF
ERGVDPELQHKVIDRATRLVLEICGGEAGPVVESKADEHLPQPANILLRRSKLDRVLGHH
IADADVTEILERLGFGVSRVDDNWQVVTATYRFDMAIEEDLIEEVARIYGYNNIPNVAPV
AALSMPLHNESDIDLKRVRAMMVARGFQEAVTYSFVDPKLQQLVHPGSDAMVLPNPISVE
MSAMRLSMFTGLLTAVGYNQSRQQNRVRLFETGLRFVPDANAESGVRQQAMLGAVIAGNQ
NDEHWSMESKTVDFFDLKGDLEAIIGLTVSEDEFTFKKASHPALHPGQCAEILRNDRVIG
VIGAVHPSLEKPFGLNGKTIVFELELDALLHASLPQAQTVSKFPANRRDIAILVDEDVSA
GNVVNLIRKVGENQLVGLNLFDVYQGKGVEPGKKSLAIALTLQDNARTLEEKEIAEMVEK
VVSELKTEFNALLRD
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagtgagtcttggcttcgtgagtgggtcaatccaagtattagccgtgacgat
ttgtcacatcagatcaccatggcgggtctggaagtcgacggtgtcgacccggtagccggt
gatttttcaggcgttatcgtgggtgaggtggtcgaatgcggccagcaccctgacgccgac
aagctacgtgtcactaagattaatgtcggtcaggatgagttgatcgatatcgtctgcggc
gcaccaaactgccgtctgggcctgaaagtggccgtggctatggtgggcgcggtattgccg
ggcgactttaagatcaagaaggccaagctacgtggtcagccatcatttggcatgctctgc
tcctatggcgagctgggtatcgacatcgagagcgacggcattatcgagctgccgctcgat
gcgcctatcggtcaagacgtacgtgagtacctggaccttaatgacgtggtgatcgatgtc
gatctgaccgctaaccgcgccgactgtcttggcatggtgggtctggcccgcgaagtgggt
gtacttaaccgtcaagcggttgttgccccgacatgggaagcggtcacccctagcatcgaa
gatgctatcgagatcgacaaccaggctcctagcgcctgtccacgctacctgggtcgtgtg
gtgaaaaacgttaacgttaaggcgcagtcgccactctggatgcaggaaaaactacgtcgc
agcggcattcgctctatcgatcctatcgtcgacatcaccaactatgtgttgatcgagttc
ggccagccgatgcacgccttcgacttggcgaagatcgacggcaagatccagatccgtctg
ggtgatggtgaggagaagctgactcttctcgatggcaacgaaattaccgtaccaaacgat
accctggttatcgccgataacagccaacctctggccttggctggtgtgtttggtggcgag
tactcgggtgtgaccggtgagacccaagatatcctgctggagtgcgccttctttgcgccg
ctggcgatcatgggtaaatcacgtcgtcttggcctgcacactgactcgtcacatcgcttc
gagcgtggcgtcgaccctgagctacaacataaggtgatcgaccgtgctacgcgcctggtg
ctagagatctgtggcggcgaagccggccctgtggttgagtctaaggccgacgagcatctg
cctcagcctgccaacatactgctgcgtcgcagcaagctagatcgcgtgctcggccatcat
attgcagatgccgatgtcaccgagatccttgagcgtcttggttttggcgtatcacgtgtg
gatgacaactggcaggttgttactgcgacttaccgtttcgatatggcgatcgaagaagat
cttatcgaagaggttgcccgcatctatggctacaacaacattccgaatgttgcgccagta
gcggccctaagcatgcctctacacaatgagtcagatatcgaccttaagcgcgtacgcgcc
atgatggtggcccgtggcttccaggaagccgtgacctacagcttcgtcgatcctaagctg
cagcaactggtgcatccgggcagcgatgctatggtgctgccaaatcctatctcggttgag
atgtcggccatgcgtttgtctatgttcaccggtctgttgactgccgtgggctacaaccag
agccgccagcaaaaccgtgttcgcctgtttgaaaccggtctgcgtttcgtgccagatgcc
aacgccgaatcgggtgtgcgtcagcaggctatgctaggtgccgtcattgccggtaaccaa
aatgacgaacattggtcgatggaatcaaaaactgtagactttttcgaccttaagggcgat
ctggaagccattatcggcttgacagtttcagaggatgaatttacttttaaaaaagcatct
catccggcgcttcatccggggcaatgtgctgaaatcttaagaaatgatcgtgtgattggt
gtcattggtgccgtccatccgagcctggaaaagcccttcggcttaaatggtaaaaccatc
gtattcgagctcgaattagacgccttattgcacgcaagtttgccgcaagcccagactgtg
tctaagtttccagcaaaccgacgtgacattgccatcctggttgatgaagatgtctcggca
ggaaatgttgtaaatttgataagaaaagttggcgaaaatcagttggttggcttaaacttg
ttcgatgtataccaaggtaaaggtgttgaaccaggtaaaaagagtctggcgattgcactt
acactacaagacaacgctcgtacacttgaagagaaagaaattgctgaaatggtagaaaaa
gtagtttctgaactcaagaccgagttcaacgcactgttgagggattaa
DBGET
integrated database retrieval system
