Shewanella loihica: Shew_2931
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Entry
Shew_2931 CDS
T00489
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
slo
Shewanella loihica
Pathway
slo03030
DNA replication
slo03430
Mismatch repair
slo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Shew_2931
03430 Mismatch repair
Shew_2931
03440 Homologous recombination
Shew_2931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slo03032
]
Shew_2931
03400 DNA repair and recombination proteins [BR:
slo03400
]
Shew_2931
Enzymes [BR:
slo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Shew_2931
DNA replication proteins [BR:
slo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Shew_2931
DNA repair and recombination proteins [BR:
slo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Shew_2931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Egg_lysin
Motif
Other DBs
NCBI-ProteinID:
ABO24797
UniProt:
A3QH49
LinkDB
All DBs
Position
3471081..3472112
Genome browser
AA seq
343 aa
AA seq
DB search
MRVYPDQLAKQLSPLKPCYLIFGDDPWLCETSKRAIFDQAKREGFEERIVLTQETGFNWR
ELQDEWNTMSLFASRRIIELHLPQAKPGSEGSSQLQSLMQQVNPDILLVITGPKLASEQT
KSKWFKQLDDKGVYIPCATPEGPQFQRWLQTRIREAGLNLTLDAQQLLLSLYEGNLLAAD
QAIQLLVLLSPSSQITSEQLQSYFEDQSRFSVFQLADCLLANQQEKAQHILAQLQAEGTA
LPILLWGQFKELTTLLQLKQAQEAGTPLQSLWSQFRIWDKRKGLYQGALSRLSLSQIETA
LASASKIELKLKQQGAEDWTAMSHLCLLYDPKAHSHLSHIELG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtctacccggaccagctcgccaagcagctctcgccgctcaagccctgttatctc
atctttggtgatgacccctggctgtgtgaaaccagcaagcgggcgatcttcgatcaggcc
aagcgagaaggtttcgaggagcgcatagtgctcactcaggagacaggctttaactggcgc
gaattgcaggatgagtggaataccatgagcctgttcgccagtcgccgcatcatagagctg
cacctgccccaggccaaacccggcagcgagggcagtagccagctacagagtctgatgcag
caggtaaatccggatattctgttggtgatcacagggccaaagcttgccagcgaacagacc
aagtcgaaatggtttaagcagctggatgacaaaggggtttatatcccctgcgccacgcca
gaagggccacagtttcagcgctggttacagacccgcattcgcgaggcagggctaaacctg
actctggacgcccagcagctgttgctgagtctgtatgaaggcaacctgctggcggcggat
caggcgatacaactgctggtgctactcagccccagcagccagatcaccagcgagcaactg
caaagctacttcgaagatcagtcccgtttcagcgtgtttcagctggccgattgcctgctg
gctaatcaacaggagaaggcccagcatatcctggcccagctccaggcagagggcacagcc
ctgccgatactgctgtggggccagtttaaggagctgaccacactgttacagctcaagcag
gcccaggaggcgggaacgccgctgcagagtctgtggagtcagttcaggatctgggacaag
cgcaaggggctgtatcagggcgcgctgtctcgcctgagtctaagtcagatagagactgcc
ctggccagcgcctcgaagatcgagctaaagctcaagcagcagggggctgaggattggacc
gccatgagtcacctttgcctgctgtacgatcccaaggctcacagccatcttagccatatc
gaactcggctag
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