Shewanella loihica: Shew_3381
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Entry
Shew_3381 CDS
T00489
Name
(GenBank) diguanylate cyclase
Organism
slo
Shewanella loihica
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
7TMR-DISM_7TM
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
ABO25247
UniProt:
A3QIE9
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Position
4028756..4030624
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AA seq
622 aa
AA seq
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MSPFKLLLLLITLSFPGFSQGESLLAVNKNQSIELASWLYYVQDDSLTSLEQVSKLSSSH
WQRLTPEFNQHLGVEPFWVKISLYNATDTQMRRYLKLGNPHLNRVSLYHLQRGKPTVHLE
IGDSYPFSQRPIINNDFLYRFELTPEVVHSFYIRVDTEGSANLPISLLSPDHIVKATETQ
SLYQGFQLGALMAIGLFSLFIALTSRSYSYSYYSGYVLSVTLLVATLHGLSFRYLWPNWP
VLQAVMIPILIPIALTFVLMFSEKVLQLKYHNLKMLRLCRYSAATGLFLTLVTPFLSYSV
ALKVNIVAVLITTSMLMLIALLLSLRGHKLARLYTLAWSGMLIGSFVTAMMYLGVIYLPI
MHQTPIMVGLSFEIVFMAAVLAIRYNDERKAKLKIQQEALLQAQRIRQAREEALQIEADS
NERLEQMVQERTLELEIALRELNEANQKLTEQNTVDSLTGVKNRAAFEKRLQAEGRLSRR
QQTPLAILMIDIDRFKAINDTYGHLAGDQALKTIAQALKEKLRRPSDLVSRFGGEEFAMI
LPNTSCDGALQVAELMRSTVSELPLAWGEQAIPLTISIGICAEVIVDDQHTQLLVDQADK
ALYRAKHEGRNRVCVYSPELEE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctttaagctgttgttactgctgatcaccctgagcttccccggctttagccaa
ggggagtcgctgctggcggtcaataaaaaccagtctatcgagctcgcctcctggctctat
tatgtgcaagatgattcgctgaccagcctggagcaggtcagcaagctaagctccagccac
tggcaacgactgaccccggaatttaaccagcacctgggggtagagcctttctgggtcaag
ataagcctctacaacgccactgatacccagatgcggcgctaccttaagctgggcaacccg
cacctgaatagggtcagcctgtaccacctacagagaggtaagccgacagttcacctggag
attggcgacagctatccgttcagccaacggcccatcatcaacaacgatttcctctatcgt
ttcgaactgacgcccgaggtagtgcacagcttctatattcgggtcgataccgagggcagt
gctaacctgcccatctccctgctgtcgccggaccatatcgtcaaggccacggagacacag
tccctctatcagggattccagctgggcgccctgatggcgattggcctgtttagcctgttt
atcgcactcacctcgcgctcctacagctacagctattactctggctatgtgttgtcggtg
accctcttggtggccacccttcacggcctgtcgttccgttatctctggcctaactggccc
gtgttgcaggcggtgatgatccccatactgatcccgatcgccctcaccttcgtgctgatg
ttttccgagaaggtgctgcagctcaagtaccacaacctcaagatgttgaggctctgtcgc
tacagcgccgctaccgggctgtttctcaccttggtcacgccgtttttaagctactctgtg
gccctcaaggtcaacatagtcgccgtgctgatcaccaccagtatgttgatgctgatcgcc
ctgctgctgagcctacgaggccataagttggccaggctctacaccctggcctggtctggg
atgcttatcggctccttcgtcaccgccatgatgtatctgggggtcatctacctgcccatc
atgcatcagacaccgataatggtcggcctgagcttcgaaatcgtctttatggcggcggta
ttggcgattcgctacaacgacgagcgtaaggccaagctcaagatccagcaggaagccttg
ctgcaggcccagcggatccgtcaggcccgggaagaggcgctgcagatcgaggccgacagc
aacgaacgcctggagcagatggtgcaggagcgcacgttagagctcgagatcgcacttcga
gaattaaatgaggccaaccagaaacttaccgaacaaaacacggtcgatagtctcacaggt
gtgaaaaaccgcgccgccttcgagaaacgcctgcaggccgaaggccgcctgagtcgtcgt
caacagacgccgctggcgatcctcatgatagatatcgaccgcttcaaggcgataaacgac
acctatggccaccttgccggggatcaggcgctcaagaccatagcccaggcgttaaaggaa
aaattaagacgcccaagtgatctggtatcacgtttcggtggtgaagagtttgctatgata
ctgcctaatacctcctgtgacggggcgctacaggtggcggagctgatgcgcagcaccgtc
agtgagttgccgctggcatggggagagcaggctattccgctcaccatcagtatcgggatc
tgcgccgaagtgatcgtcgatgatcagcacactcagctgctggtcgaccaggcagacaag
gcactctatcgtgccaagcatgagggccgaaatcgcgtttgcgtctattcgcccgaactc
gaagaataa
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