KEGG   Streptomyces longhuiensis: LGI35_23180
Entry
LGI35_23180       CDS       T09038                                 
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
slon  Streptomyces longhuiensis
Brite
KEGG Orthology (KO) [BR:slon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:slon03021]
    LGI35_23180 (sigM)
Transcription machinery [BR:slon03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LGI35_23180 (sigM)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_23 Xre-like-HTH RWP-RK HTH_psq FliO
Other DBs
NCBI-ProteinID: UDM00967
LinkDB
Position
5000738..5001463
AA seq 241 aa
MDDAAYGEASDQDLLARHVAGDKDAFGELVRRHRDRLWAVALRTLGDREEAADAVQDALV
SAYRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRKTSPVEDTERLDQLLEPHESAAA
PAERNDLHRELFEALGTLPVDQRAALVLVDMQGYPVAEAARVLGVPTGTIKSRCARGRAR
LLPLVTHLRTDNGENASGKNPPPEAPERNRTQGTSVPPAAGPRDGAGPSDSAAVKGGGGR
A
NT seq 726 nt   +upstreamnt  +downstreamnt
gtggacgacgccgcctatggcgaagcaagcgatcaggacctcctcgcccgccacgtcgcg
ggtgacaaggacgccttcggtgagctcgtgcgccgccatcgtgatcgcctgtgggctgtc
gcgctgcgcaccctgggagaccgggaggaagccgccgacgccgtccaggacgccctggtc
tccgcctaccgggcggcgcacacgttccgcgggcagtctgccgtcacgacatggctgcac
cgcatcaccgtgaacgcctgcctcgaccgggcccgcaaggccgcgtcgcggaagacttct
ccggtcgaggacacggagcgcctggaccagctcctcgaaccccacgagtccgcggctgcc
cccgccgaacgcaacgatctgcaccgtgaactcttcgaagcgctgggcacccttcccgtc
gaccagcgtgccgcgctcgtcctggtcgacatgcagggctacccggtggccgaggcggcc
cgcgttctcggtgttcccaccggcacgatcaagagccgctgtgcgcgcggcagagccaga
ctcctgccgttggtcacccatctgcggaccgacaacggcgagaacgcgagtggcaagaac
ccgcccccggaagcgcccgaaaggaaccggacgcaggggacatccgtcccaccggcagca
gggccccgggacggggcaggaccaagtgattcagctgccgtgaagggcggaggtgggcga
gcgtga

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