Streptomyces longhuiensis: LGI35_25050
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Entry
LGI35_25050 CDS
T09038
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
slon
Streptomyces longhuiensis
Pathway
slon00550
Peptidoglycan biosynthesis
slon01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
slon00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LGI35_25050 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
slon01002
]
LGI35_25050 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
slon01011
]
LGI35_25050 (dacB)
Enzymes [BR:
slon01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LGI35_25050 (dacB)
Peptidases and inhibitors [BR:
slon01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
LGI35_25050 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
slon01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
LGI35_25050 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Peptidase_M17_N
Motif
Other DBs
NCBI-ProteinID:
UDM01303
LinkDB
All DBs
Position
5407048..5408487
Genome browser
AA seq
479 aa
AA seq
DB search
MLTKVKTWQLTAGAATLGLALSAVAVASAGPWDSSGQRTAEARRAVSQEAGGGTDHGRDG
RSDEPDAAPSARAVLTAAGASAPGPTKGALADVLDPLLNDPALGKRRTAAVVDAATGERL
YGKSSGDALTPASTTKLATAVAALSMPGSDHRIDTKTVIEPDSSAHEVVLVGGGDPTLTA
RKDAGANASLRALADATAKELKARDTDEITLSYDTSLYSGPPLHPIGPNENIAPVSALMA
DEARMDDSSSGPAPRESDPAAAAARKFADLLHDRGIRTKGEPGPRKASGDAEKLAEVSSP
PVSALVERMLTHSDNDIAEALARQVALATDEAASFDGGGAAIRKELDKLRLPLSGSHFAD
GSGLDRADKVSADLLTQVLAHAVERERPGLRPVLTGLPVAGFTGTLSKRYTDEADAAGIG
LVRAKTGTLTGVNTLAGTVVDADGRLLVFAFMTDGTVNPGQAQAALDRLASTVANCGCR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcttacgaaggtcaagacctggcagctcacggcgggcgctgccaccctgggcctggcg
ctctcggccgtggcggtggcctcggccggtccgtgggactccagcggtcagcgtacggcg
gaggcgcgccgagctgtgtcccaggaggccgggggtggcacagatcacggccgcgacggg
cgctccgacgagccggacgccgccccgagtgcccgtgccgtcctcacggcggcgggcgcc
tcggcccccggccccaccaagggtgcgctcgccgacgtgctcgaccctctcctgaacgac
ccggccctcggcaagcggcgcaccgcggccgtcgtcgacgcggccaccggcgagcggctg
tacggcaagagctccggcgacgccctgacgcccgcgtcgaccaccaagctcgccaccgcg
gtcgccgccctgtcgatgccgggatccgaccaccgcatcgacacgaagaccgtcatcgag
cccgactcgtcggcgcacgaggtcgtcctcgtcggcggcggagaccccacgctcaccgcc
cgcaaggacgccggggcgaacgcgagcctgcgcgccctcgccgacgccaccgccaaggaa
ctcaaggcccgggacacggacgagatcacgctctcgtacgacacctcgctctactcgggg
ccgcccctgcaccccatcgggcccaacgagaacatcgcgccggtcagcgccctcatggcc
gacgaggcgcgcatggacgactcgtcgagcggcccggcgccccgcgagtccgacccggcc
gccgccgccgcgcggaagttcgcggatctgctgcacgaccgcggcatcaggacgaagggc
gagccgggcccgcgcaaggcgtcgggcgacgccgagaaactggccgaggtgtcgtcgccg
cccgtgtcggccctggtcgagcgcatgctgacgcacagtgacaacgacatcgcggaggcc
ctggcccgccaggtggcgctcgccacggacgaggccgcgagcttcgacggcgggggcgcg
gcgatccgcaaggagctggacaagctccgactcccgctctccggaagccacttcgcggac
ggcagcggcctcgaccgcgccgacaaggtctccgccgacctgctcacccaggtcctcgcg
cacgccgtcgaacgagagcgccccgggctgcgtcccgtcctcaccggactgcccgtcgcc
ggcttcacgggcacgctgagcaagcggtacaccgacgaggccgacgcggcgggcatcggt
ctcgtacgggccaagaccggcacgctgaccggggtgaacacgctggccggcacggtcgtc
gacgcggacgggcggctcctggtcttcgcgttcatgacggacggcaccgtgaacccggga
caggcccaggcggccctggaccgcctcgcgtcgacggtcgcgaactgcggctgccgctga
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integrated database retrieval system
