Syntrophothermus lipocalidus: Slip_1073
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Entry
Slip_1073 CDS
T01253
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
slp
Syntrophothermus lipocalidus
Pathway
slp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
slp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Slip_1073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slp03400
]
Slip_1073
DNA repair and recombination proteins [BR:
slp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Slip_1073
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_27
Motif
Other DBs
NCBI-ProteinID:
ADI01851
UniProt:
D7CMB6
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Position
1103873..1106503
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AA seq
876 aa
AA seq
DB search
MTKLTPMMEQYRAIKEQYPDCILFFRLGDFYEMFFEDAEIAAQILEIVLTARDGGSGVKV
PMCGVPFHAADTYISRLIAKGYRVAICEQVEDPALTKGLVKREVVRVITPGTVVDVSMLE
AGENNYLVALAENESAIGLAVIDVSTGDFQATEVSGPEASSLVLSELYRLRPAECLIPAW
TQRESILYEFTEKFQNSVVTEMDPTYYQYAWAEAKLREFFEVEDLVELGLESCPAAVIAA
AVIVAFLESTCRAQLKHLSRIRTYQPREYLGLDVNTRRNLELTRNLKDGKREGSLLAVID
CCRTAMGRRLLQRWLEQPLVDVKAINERLDAVEEMYNSFSLRERIREILGDVHDIERLAG
RIGSGVASPRELLALKNSLINLPAFKALLPEVRTHLLKKILELDTLEDVYRLLDSVLDEN
APASIREGGIIKPGCNPEVDELRKLAFEGKEWLLEYEQGERERTGIKSLKLGFNRVFGYF
IEVTKPNVHLVPSHYVRKQTLVNAERYITDDLKNYEEKVLSARERLVLLEQELFQVLREE
VACHVSRLQEVAGALAKLDVIACLAETAFRHDYVRPLVDDSDVIFVKNGRHPVVERFLGS
ESFVPNDTYLDDKERRLAIITGPNMGGKSTYMRQVALITILAQVGSFVPATEARIGVVDQ
VFTRVGASDDLVGGQSTFMVEMVEVAHILKNATRKSLVILDEIGRGTSTFDGMSIAQAVL
EHICSHIGAKTLFATHYHELTGLDEVLPGVFNLSVSVKESAGAVIFLKKVIPGRADKSYG
IQVAGLAGLPVGVIQRAGEILRSLESKGGVDKVEAINASNVVQLALFQEEHPLVEELKQL
ELDDMTPLEALQLLYRWREQLVAPSKKGKRNKRGGG
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaactcacgccgatgatggagcagtaccgggctatcaaggaacagtacccggac
tgcattctgtttttccgactgggcgacttttacgaaatgtttttcgaagacgcggaaata
gccgcgcagatactggagatagtattgactgccagagacggaggttctggtgtcaaggtt
cccatgtgcggggttcccttccacgccgcggatacctatataagcaggctcatcgccaag
ggttaccgcgtggccatatgcgaacaggtcgaagacccggctttaaccaaaggcctggtc
aagcgggaagtggtacgggtcataacgccggggacggtagttgatgtttccatgctggag
gcaggagaaaacaactacctggttgccttggcggagaacgagtcggctatcggcttggcc
gtcatcgatgtgtccaccggtgattttcaggcaaccgaagtcagtggtcccgaggcttct
tcgctggtattaagcgagctttaccggctccgccccgccgagtgtttgatcccagcttgg
acccagcgggagtcaatactctacgagttcacggaaaagtttcagaattcggttgttacc
gagatggacccgacgtactaccagtatgcttgggctgaagcgaaactcagggaatttttt
gaggtcgaagacctagtcgagttagggttagagtcatgcccggcagcggtgatcgcggcg
gcggttatcgtcgctttccttgaatcgacctgccgggctcagttgaagcacctcagccgg
atcaggacgtaccaaccccgtgagtatttggggttggacgtgaacacccgccgcaatttg
gagcttacgcgcaacttgaaggatggtaaaagagaaggatcgcttttggcggtgatcgac
tgttgccggactgccatgggacggaggctcctgcagagatggcttgagcagccgctggtt
gacgtgaaggccataaacgaacgcttggatgctgtggaagagatgtacaactcgttttcg
ttgcgggagaggataagagaaattttgggagacgtccatgatatagaaaggctggcggga
agaatcggaagcggcgtagctagtccccgcgagcttttggcgttgaaaaattcattgata
aatttgcccgcttttaaggctttgttaccggaagtacgaactcatctcttgaagaagatt
ctagagttggatactctggaggatgtttaccggctattagattccgttttagacgagaac
gctccggcttctattcgagaagggggcatcattaaacccggttgcaacccggaagtggac
gagctaaggaagctggcttttgaaggaaaagaatggcttttggaatatgaacagggcgaa
agggaacgaaccggaataaagtcattgaagttagggttcaaccgcgtattcggttacttt
atagaagtaaccaagcccaatgttcacctggttccgtcccattacgtgcgcaagcagacc
ctggtcaatgccgaaaggtatattacggacgacctgaaaaactatgaagaaaaggtcctc
agcgccagggaaaggttggttcttctggaacaggagctttttcaggttttgcgcgaagaa
gtggcctgccacgtttcacgtttgcaggaggtagcaggtgcacttgctaaactcgatgtt
atagcatgcctggctgagaccgctttccgtcacgactacgtacgacccttggtggacgat
tcggatgtcatttttgttaagaatggccggcacccggtggtggaaaggtttttgggaagc
gagagcttcgttcccaacgatacctatctcgacgataaggaacgtcggttggctatcatt
accggtcccaacatgggcggcaaaagcacctatatgcgccaagtggcacttattaccatc
ttggcgcaggtaggaagcttcgtaccggccacagaagcccgtataggggttgttgaccag
gtgtttacgagggtcggggcctccgatgacctcgtgggcggtcagagcacgtttatggta
gaaatggtggaggttgcccatatcttaaaaaacgctactcgaaagagtctggttattttg
gacgagatcggcaggggtacgagcacgtttgatggaatgagtatagcgcaggcagtgttg
gagcacatatgtagccatataggagccaaaaccctttttgcaactcattaccacgagctg
accggattggatgaagtattgcccggcgttttcaacctgtcggtttccgttaaagaaagc
gcaggggccgtgattttcttgaaaaaagtaatcccgggcagggcggataaaagttatggt
atccaggttgcggggttggccggcctgccagttggggtcatacagagggcaggagagata
ctgagaagtctggagagcaaaggaggcgtcgataaagtcgaagcgattaacgcgtccaac
gttgtccagctcgctttgtttcaggaagagcacccgctggtggaagaacttaaacagcta
gagctggatgacatgacaccgcttgaggctctgcagttgttgtatcggtggcgcgaacag
ctggtggcgcccagcaagaagggaaagaggaacaagcgaggaggtggttga
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