Sander lucioperca (pikeperch): 116039820
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Entry
116039820 CDS
T07345
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
sluc
Sander lucioperca (pikeperch)
Brite
KEGG Orthology (KO) [BR:
sluc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sluc03016
]
116039820 (tyw1)
Enzymes [BR:
sluc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
116039820 (tyw1)
Transfer RNA biogenesis [BR:
sluc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
116039820 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Flavodoxin_5
Motif
Other DBs
NCBI-GeneID:
116039820
NCBI-ProteinID:
XP_031140748
Ensembl:
ENSSLUG00000023662
LinkDB
All DBs
Position
5:complement(33531275..33595042)
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AA seq
784 aa
AA seq
DB search
MLISQKYGCTQHQLQRTVYFNTPIANMLSFFVIIVLCINRVSTLDTKVSQNAHSPSESYL
MSIWQNRLYLYSAAALVFGIWFSLKLVLKKKSFSKDVGPWVYKAVKSNDIPDRDTSVHVS
GVKIFYGSQTGTAKGFAEELSEEVKTLGIPAEVIDIKDYDPDDQLADECTNKSVCVFLVA
TYTDGQPTENAEWFCKWLEEASTDFRYGKTYLKGLRYAVFGLGNSVYVGHYNTVGKNVDK
WLWMLSGMRIMTRGEGDCNVVKSRNGSIQADFVSWKVRFLKRLQALAKGEKKSCSGNCKT
GGLCKSKRKDGQEEEEEKEEEKEEKAALQNNSSEEDLIESSSDEEDSGLQDEKNSGSVVD
MEDLGKIMNSAKKAKSKEEGRGDGQMVKLSKLNGVKKIEDDVERREMITPALRGALTKQG
YKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHT
NPVGTEWRWKMDPAEKILQDALEKHQSMIRQFRGVPGVKPERYEEGLAVKHCALSLVGEP
IMYPEINTFIRLLHSHRISSFLVTNAQFPKEIRSLVPVTQLYVSVDASTKDSLKKIDRPL
FKDFWPRFLDSLRALGEKRQRTVYRLTLVKAWNVEEMQSYSELIALGQPDFIEVKGVTYC
GESSASSLTMANVPWHQEVVAFVQQLADMLPQYEIACEHEHSNCLLMAHTKFKVDGEWWT
WIDYERFQELVQAHEESGGQQGFSALDYMAKTPSWALFGASEQGFDPADTRFQRRNKTKD
ISGC
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcagccaaaaatatggttgcacacaacatcagctgcagaggactgtgtatttt
aatacaccaattgcaaatatgctgagtttcttcgtgattattgttctttgcataaatcgt
gtgtctactttggatactaaagtctcacagaatgcccacagtcccagtgagagctatctc
atgtccatatggcaaaacagactgtacttgtattcagctgctgcactagtctttgggatc
tggttctcacttaagttggtactgaagaagaaaagcttctccaaagacgtcggcccgtgg
gtctacaaagctgtgaagagcaatgacatccctgacagagacacctcagttcatgtgtcc
ggagttaaaatcttctacggttcacaaactggaactgcaaagggttttgcagaagagctg
tcagaggaggtgaagactttgggtataccagcagaggtgatcgacatcaaagactacgat
ccagacgatcaacttgctgatgagtgcaccaacaagtcagtctgtgtatttcttgtggcc
acctacactgacggacagcccacagagaacgctgagtggttctgcaagtggttggaggag
gcatccactgatttcagatacgggaagacctacctcaaaggcctcagatatgctgtgttt
ggtcttggcaactctgtctatgttggccactataatacggtgggtaaaaacgtggacaag
tggctttggatgctgagtggcatgcgaatcatgaccaggggcgagggcgactgtaatgtg
gtgaagagccgtaatggcagcattcaggcagacttcgtgtcctggaaggtcaggttcctg
aagcgcctacaggccctggccaagggtgagaagaagagctgcagcgggaactgtaagact
ggaggcctctgtaagagcaagaggaaagacggccaggaggaggaggaggagaaggaggag
gagaaggaggagaaggcagctctgcagaataacagctcggaggaggatcttatagagtcc
agcagtgatgaggaggactcaggcctgcaagatgagaaaaactccggttcagtggttgac
atggaggatctgggcaagatcatgaacagtgccaagaaagcaaagagcaaggaggagggt
cgaggagacggccagatggtgaagctatccaagttgaacggcgtgaagaagattgaagat
gacgtggaaagaagagagatgatcacccctgcccttagaggggcactaacaaaacaaggg
tacaaactaattggaagtcactcaggagtgaagctttgtcgatggaccaagtccatgttg
cgagggagaggaggctgttacaagcacactttctatggtattgagtcccaccggtgcatg
gagactacccccagcctcgcctgtgctaacaagtgtgtcttctgctggagacaccacacc
aaccctgtgggcacagagtggcgctggaagatggaccctgccgagaagatcctgcaggat
gccttggagaagcaccagagcatgattcgacagttcagaggtgtccctggagtgaagccc
gagcggtatgaggagggcttggcagtcaagcactgtgccctctccctggtgggtgagcca
atcatgtaccccgaaatcaacaccttcatccgcctcctccactctcatcgcatctccagc
ttcctggtcaccaatgcacaattcccaaaggaaatcaggagcctggtgccagttacccag
ttgtacgttagtgtggacgccagcaccaaagacagtctgaagaagattgaccgaccactt
ttcaaggacttctggccccgcttcctggatagcctcagggccctgggagagaagagacag
aggacggtgtatagactgacgctggtaaaggcctggaatgtggaggagatgcagtcctac
tcagagctcattgctttgggccagccggacttcatcgaggtcaagggagtgacgtactgt
ggggaaagctctgccagcagtctgaccatggctaatgtcccctggcaccaggaagtggtc
gccttcgtccagcagctggctgacatgttgcctcagtatgagatcgcctgcgaacacgag
cactccaactgtttgctcatggcacacaccaagttcaaggtggatggcgagtggtggacg
tggatcgactacgagcgtttccaggagctggtccaggctcatgaggagagtgggggacag
cagggcttctcagccttggactacatggccaagacgcctagctgggctctgtttggagcc
agtgagcaaggttttgaccccgccgacacacgcttccaacggcgcaacaaaaccaaagac
atttcaggatgctga
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