Solanum lycopersicum (tomato): 101244488
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Entry
101244488 CDS
T02665
Name
(RefSeq) uncharacterized protein LOC101244488 isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sly
Solanum lycopersicum (tomato)
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sly03016
]
101244488
Enzymes [BR:
sly01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
101244488
Transfer RNA biogenesis [BR:
sly03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
101244488
Prokaryotic type
101244488
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
101244488
NCBI-ProteinID:
XP_004239896
UniProt:
A0A3Q7GJW1
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Position
5:complement(64157981..64162772)
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AA seq
327 aa
AA seq
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MCFSAALALPLLPNLEKSSANCISNCSRKDEDSNKGQSVKLTLPAYKWRLVIAYDGTRFS
GWQYQQSTPTVQCILEEALTKKTKINRKELCVVGASRTDAGVHAWGQVAHFITPFNYETL
DGVHRAINGLLPSDIRVREFSPAGPEFHARFSVTSKIYCYQVYNSTILDPFLRHYAYHSE
YKLNADVMRDAAKHFVGKHDFSAFANTSRNDRVPNPVKTILRFDVVEKGPLLRLEVEGSG
FLYRQVRNMVALLLQVGRQAVPPDIVVRILESRDRKELAKYTLLLPPHGLSLETVKYNEE
HLILPTDSPASSFGRHHSISKCKVLFI
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtgtttctcagcagctttggcgcttccattacttccaaatctcgagaaaagttcagca
aattgtatctcaaattgtagtcgaaaggatgaagattcaaataagggtcaatcggtgaaa
ctgacattaccagcttataaatggcgattagttattgcttacgacggtaccagattttca
ggatggcagtatcagcagtcgacaccaactgtacagtgcattttggaagaagctctgact
aaaaaaacgaaaataaaccgtaaagaactttgtgtagttggtgcgagccggacagatgca
ggagttcatgcatggggtcaggtggcacatttcattacacctttcaactatgaaacacta
gacggcgttcatagagctataaatggtcttcttccttctgacatcagagttagagaattt
agccctgcaggacctgagtttcatgcgcgtttctctgttacaagcaagatatattgctac
caagtatataattccactatcctggacccattcttgaggcactatgcttaccatagtgag
tataaactcaatgctgatgtcatgagagatgccgcaaagcatttcgtggggaaacatgac
ttttctgcctttgccaatacatcacgaaatgaccgggtgccaaatccagtgaagacgata
ttgcgctttgatgttgttgaaaagggacctcttttgcggctagaagttgaaggttctggt
ttcctatatagacaagttcggaacatggtcgctttgttgcttcaagttggacggcaagca
gttccaccagatattgttgttaggattttggaatctcgtgataggaaggaacttgctaag
tataccttgttacttccacctcatggactcagtctcgagactgtcaagtataatgaagaa
catctcatacttccaacagattccccagctagtagctttggtaggcaccatagtataagc
aaatgtaaggtgctattcatttga
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