KEGG   Solanum lycopersicum (tomato): 101259753
Entry
101259753         CDS       T02665                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
sly  Solanum lycopersicum (tomato)
Pathway
sly03020  RNA polymerase
sly03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sly00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101259753
  09124 Replication and repair
   03420 Nucleotide excision repair
    101259753
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sly03021]
    101259753
   03019 Messenger RNA biogenesis [BR:sly03019]
    101259753
   03400 DNA repair and recombination proteins [BR:sly03400]
    101259753
Transcription machinery [BR:sly03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     101259753
Messenger RNA biogenesis [BR:sly03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     101259753
DNA repair and recombination proteins [BR:sly03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      101259753
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 101259753
NCBI-ProteinID: XP_004240381
UniProt: A0A3Q7HIM8
LinkDB
Position
6:complement(819639..823964)
AA seq 177 aa
MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGTNA
NT seq 534 nt   +upstreamnt  +downstreamnt
atgtttttccacattgtattggagagaaacatgcagcttcatcctcgtcactttggtcgt
gatcttcgtgaaaaacttgtgtcaaaactgatgaaagatgtagaaggaacttgcagtggt
cgacatggttttatagtggcgattactgggattgaaagtgttggaaaaggattaattcgt
gatggaactggttttgttactttcccagtgaagtatcaatgtgttgtatttcgacccttt
aaaggtgagattttggaagctgttgtcaccatggttaacaagatgggattttttgctgaa
gcagggcctgtgcagatttttgtctcaaatcacttgatacctgatgacatggagtttcaa
tcgggggatgtgccaaattatacaacttcagatggttcggttaaaattcagaaggaaagt
gaagttagattgaagattatcggaacacgtgttgatgccacagaaattttctgtattggt
acgataaaggatgatttcctgggtgtgatcagtgacccaggcacaaatgcttga

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