Solanum lycopersicum (tomato): 101259753
Help
Entry
101259753 CDS
T02665
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
sly
Solanum lycopersicum (tomato)
Pathway
sly03020
RNA polymerase
sly03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sly00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
101259753
09124 Replication and repair
03420 Nucleotide excision repair
101259753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sly03021
]
101259753
03019 Messenger RNA biogenesis [BR:
sly03019
]
101259753
03400 DNA repair and recombination proteins [BR:
sly03400
]
101259753
Transcription machinery [BR:
sly03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
101259753
Messenger RNA biogenesis [BR:
sly03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101259753
DNA repair and recombination proteins [BR:
sly03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
101259753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Vg_Tdu
Motif
Other DBs
NCBI-GeneID:
101259753
NCBI-ProteinID:
XP_004240381
UniProt:
A0A3Q7HIM8
LinkDB
All DBs
Position
6:complement(819639..823964)
Genome browser
AA seq
177 aa
AA seq
DB search
MFFHIVLERNMQLHPRHFGRDLREKLVSKLMKDVEGTCSGRHGFIVAITGIESVGKGLIR
DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVISDPGTNA
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtttttccacattgtattggagagaaacatgcagcttcatcctcgtcactttggtcgt
gatcttcgtgaaaaacttgtgtcaaaactgatgaaagatgtagaaggaacttgcagtggt
cgacatggttttatagtggcgattactgggattgaaagtgttggaaaaggattaattcgt
gatggaactggttttgttactttcccagtgaagtatcaatgtgttgtatttcgacccttt
aaaggtgagattttggaagctgttgtcaccatggttaacaagatgggattttttgctgaa
gcagggcctgtgcagatttttgtctcaaatcacttgatacctgatgacatggagtttcaa
tcgggggatgtgccaaattatacaacttcagatggttcggttaaaattcagaaggaaagt
gaagttagattgaagattatcggaacacgtgttgatgccacagaaattttctgtattggt
acgataaaggatgatttcctgggtgtgatcagtgacccaggcacaaatgcttga
DBGET
integrated database retrieval system