Streptomyces avermitilis: SAVERM_4655
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Entry
SAVERM_4655 CDS
T00126
Symbol
gadB2
Name
(GenBank) putative glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sma
Streptomyces avermitilis
Pathway
sma00250
Alanine, aspartate and glutamate metabolism
sma00410
beta-Alanine metabolism
sma00430
Taurine and hypotaurine metabolism
sma00650
Butanoate metabolism
sma01100
Metabolic pathways
sma01110
Biosynthesis of secondary metabolites
sma01120
Microbial metabolism in diverse environments
sma02024
Quorum sensing
Module
sma_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sma00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
SAVERM_4655 (gadB2)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
SAVERM_4655 (gadB2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SAVERM_4655 (gadB2)
00430 Taurine and hypotaurine metabolism
SAVERM_4655 (gadB2)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAVERM_4655 (gadB2)
Enzymes [BR:
sma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
SAVERM_4655 (gadB2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
BAC72367
NITE:
SAV4655
UniProt:
Q82EG0
LinkDB
All DBs
Position
complement(5678301..5679713)
Genome browser
AA seq
470 aa
AA seq
DB search
MPLHKGPVKSDERPMSFNPFFGEANPVSGMTEAPPKHRLADGPLPPSTAYQLVHDELMLD
GNARLNLATFVTTWMEPQAGVLMAECQDKNMIDKDEYPRTAELEKRCVAMLADLWNAPDA
GAAVGCSTTGSSEACMLAGLALKRRWARRNADRYPARDVRPNLVMGINVQVCWEKFCNFW
EVEMRQVPLEGERYHLDPGAAAELCDENTIGVVGILGSTFDGSYEPIAELCAALDALQER
TGLDIPVHVDGASGAMIAPFLDEDLVWDFRLPRVASINTSGHKYGLVSPGVGWALWRDSE
ALPEELVFRVNYLGGNMPTFALNFSRPGAQVVAQYYTFLRLGREGFRAVQQTTRNVARSL
AERVAALGDFHLLTRGDELPVFAFTTAPEVASYDVFDVSRRMREHGWLVPAYTFPPNRED
LSVLRVVCRNGFSTDLAELFVEDLSRLLPDLRRQARPQTHDKDAATGFHH
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgccgctccacaaaggccccgtgaagtccgacgaacgcccgatgtccttcaacccgttc
ttcggggaggccaatccggtcagcgggatgaccgaggccccgcccaagcaccggctcgcg
gacgggccgctgccgccctcgacggcgtaccagctcgtgcacgacgaactgatgctggac
ggcaacgcgcgcctcaacctcgccaccttcgtcaccacctggatggagccgcaggccggg
gtgctgatggcggagtgccaggacaagaacatgatcgacaaggacgagtacccgcgcacc
gccgagctggagaagcggtgcgtggcgatgctcgccgatctgtggaacgcgcccgacgcg
ggggcggccgtgggctgttcgacgaccggttcgagcgaggcgtgcatgctcgccgggctg
gcgctgaagcgccgctgggcgcggcgcaacgcggaccgctaccccgcgagggacgtccgt
ccgaacctcgtcatgggcatcaacgtccaggtctgctgggagaagttctgcaacttctgg
gaggtcgagatgcgccaggtccccttggagggcgagcggtaccacctcgatccgggagcc
gccgccgagctgtgcgacgagaacaccatcggggtcgtcgggatcctcggctccaccttc
gacgggtcgtacgagccgatcgccgaactgtgcgcggccctcgacgccctccaggagcgg
accgggctcgacataccggtgcatgtggacggcgcgtccggcgccatgatcgcgcccttc
ctcgacgaggacctggtctgggacttccggctgccgcgggtcgcgtcgatcaacacgtcc
gggcacaagtacggcctcgtctccccgggcgtcggctgggcgctgtggcgggacagcgag
gcgctgcccgaggaactcgtcttccgcgtcaactacctgggcggcaacatgccgaccttc
gcgctcaacttctcccggccgggagcccaggtcgtcgcgcagtactacaccttcctgcgg
ctcggccgggagggcttccgggccgtgcagcagacgacgcggaacgtggcgcgcagcctc
gccgagcgtgtggcggcgctgggcgacttccatctgctcacccgcggcgacgagttgccc
gtcttcgccttcacgaccgcgccggaggtcgcctcgtacgacgtcttcgacgtgtcccgg
cggatgcgtgagcacggctggctggtgcccgcgtacacgttcccgccgaaccgggaggac
ctgtccgtgctgcgggtggtgtgccgcaacggcttctccaccgacctcgccgaactgttc
gtcgaggacctgagccgcctcctgcccgacctgcgccgccaggcgcgcccacagacccac
gacaaggacgcggcgaccggtttccatcactag
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