Serratia marcescens subsp. marcescens Db11: SMDB11_0516
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Entry
SMDB11_0516 CDS
T03985
Symbol
cydB
Name
(GenBank) cytochrome d terminal oxidase, subunit II
KO
K00426
cytochrome bd ubiquinol oxidase subunit II [EC:
7.1.1.7
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00190
Oxidative phosphorylation
smac01100
Metabolic pathways
smac02020
Two-component system
Module
smac_M00153
Cytochrome bd ubiquinol oxidase
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
SMDB11_0516 (cydB)
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SMDB11_0516 (cydB)
Enzymes [BR:
smac01000
]
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.7 quinol oxidase (electrogenic, proton-motive force generating)
SMDB11_0516 (cydB)
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Motif
Pfam:
Cyt_bd_oxida_II
Motif
Other DBs
NCBI-ProteinID:
CDG11100
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Position
552313..553452
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AA seq
379 aa
AA seq
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MFDYEVLRFIWWVLVGVLLIGFAVTDGFDMGVGILVRIIGKTDTERRVMINSIAPHWDGN
QVWLITAGGALFAAWPMVYAAAFSGFYVAMILVLAALFFRPVGFDYRSKLESSRWRNMWD
WGIFIGSFVPAVVFGVAFGNLLQGVPFHMDEYMRLFYTGNFFQLLNPFGLLAGVVSLTML
VTQGATYLQMRTTGEIHLRSRAAAQIATLIMAVCFLLAGVWLVKGIDGFVVTSALDTLAE
SNPMRKEVAHQAGAWLINFNKYPLLWALPALGVVLPLFTILFSRLEKGALAFVTSSLTIA
CVILTAGVTMFPFVMPSSTVPNVSLTMWDATSSLLTLKVMTVVAAIFVPIVLAYTSWSYY
KMFGRLDKNYIENNKHSLY
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatgaagtactgcgatttatttggtgggtcctggttggcgttctgctgatc
ggcttcgccgtcaccgacggtttcgacatgggcgtcggcattctggtgcgcatcatcggc
aaaaccgacaccgagcgccgggtgatgatcaactccatcgctccgcactgggacggtaac
caggtgtggctgatcaccgccggcggcgcgctgttcgccgcctggccgatggtctacgca
gcggccttctccggcttctacgtcgccatgatcctggtgctggccgccttgttcttccgc
ccggtcggtttcgactaccgttccaagctggagagcagccgctggcgcaacatgtgggac
tggggcatcttcatcggctccttcgtgcctgcagtggtattcggtgtggcgttcggtaac
ctgctgcagggcgtgccgttccacatggacgagtacatgcgcctgttctacaccggcaac
ttcttccaactgctgaacccgttcggtctgttggcgggcgtggtcagcctgaccatgctg
gtcacccagggcgcgacctacctgcaaatgcgcaccaccggcgagatccacctgcgttca
cgcgctgcggcacagatcgcgacgctgatcatggcggtatgtttcctgctggcgggcgta
tggctggtgaaaggcatcgacggcttcgtcgtgacgtcggcgttggacaccctggcggaa
tccaacccgatgcgtaaagaagtggcgcatcaggccggtgcttggctgatcaacttcaac
aagtatccgctgctgtgggccttgcctgcactgggcgtagtgctgccgttgttcaccatc
ctgttctcgcgtctggagaagggcgcgctggcgttcgtcacctcgtcgttgaccatcgcc
tgcgtcatcctcaccgccggggtcaccatgttcccgttcgtgatgccgtcgagcactgtg
cctaacgtcagcctgaccatgtgggatgcgacctcgagcctgttgacgctgaaagtgatg
accgtcgtggcggcgatcttcgtgcctatcgttttggcgtacaccagctggtcgtactac
aaaatgttcggtcgcctcgacaagaactacatcgaaaacaacaagcattcgttgtactaa
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