Serratia marcescens subsp. marcescens Db11: SMDB11_2771
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Entry
SMDB11_2771 CDS
T03985
Symbol
fadJ
Name
(GenBank) fatty acid oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
smac
Serratia marcescens subsp. marcescens Db11
Pathway
smac00071
Fatty acid degradation
smac00280
Valine, leucine and isoleucine degradation
smac00310
Lysine degradation
smac00362
Benzoate degradation
smac00380
Tryptophan metabolism
smac00410
beta-Alanine metabolism
smac00640
Propanoate metabolism
smac00650
Butanoate metabolism
smac00907
Pinene, camphor and geraniol degradation
smac00930
Caprolactam degradation
smac01100
Metabolic pathways
smac01110
Biosynthesis of secondary metabolites
smac01120
Microbial metabolism in diverse environments
smac01200
Carbon metabolism
smac01212
Fatty acid metabolism
Module
smac_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smac00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SMDB11_2771 (fadJ)
00650 Butanoate metabolism
SMDB11_2771 (fadJ)
09103 Lipid metabolism
00071 Fatty acid degradation
SMDB11_2771 (fadJ)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SMDB11_2771 (fadJ)
00310 Lysine degradation
SMDB11_2771 (fadJ)
00380 Tryptophan metabolism
SMDB11_2771 (fadJ)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SMDB11_2771 (fadJ)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SMDB11_2771 (fadJ)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SMDB11_2771 (fadJ)
00930 Caprolactam degradation
SMDB11_2771 (fadJ)
Enzymes [BR:
smac01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SMDB11_2771 (fadJ)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SMDB11_2771 (fadJ)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SMDB11_2771 (fadJ)
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Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CDG13342
LinkDB
All DBs
Position
complement(2930128..2932293)
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AA seq
721 aa
AA seq
DB search
MSAENALHEQRAKPSAFQLTIRPDNIGVITIDVPGDKVNTLKAEFVEQVNDVLIRAQQHT
ALEGLVIVSGKPDSFIAGADITMIAACTSAKEAETLAKKGQSTLAQIAAFPVPVVAAIHG
ACLGGGLELALACHGRVCSLDDKTALGLPEVQLGLLPGSGGTQRLPRLVGAAKALDMILT
GKHIRARQALRMGLVDDAVPQSILLQTAIERVKQGWKHQRELPWQDRLLNGPLGRNLLFS
IVRKKTLAKTHGNYPAAERIIQVVRTGLDHGSASGYEAEARAFGELAMTPQSAALRSLFF
ASTALKKERGGNAKPHALHRVGILGGGLMGGGIACVTATRGGLPVRIKDINETGINHALK
YSWDVLGKRVRSKRMRPAERQKQMMLISGSTDYTGFEQVDIVVEAVFEDLALKQKMVAEV
EANCAPHTVFASNTSSLPIGHIAEKAQRPQQVIGLHYFSPVDKMPLVEVIPHAGTSEETI
ATTVALAHKQGKTAIVVGDSAGFYVNRILAPYINEAARCLLEGEPMESLDKALVDFGFPV
GPITLLDEVGIDVGTKIIPVLVEALGPRFAAPAAFDAVLKDGRKGRKNGRGFYLYPSEGQ
QRQRRKRADTSLYTLLGVTPKAHMLPATVAQRCVMMMLNEAARCLDEGVIRSARDGDIGA
VFGIGFPPFLGGPFRYMDELGAEKVVKTLEYLRQQHGEHFAPCERLQRMAQQGERFYPLG
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgaaaacgcattgcacgaacagcgggccaaaccgtcggcctttcagctgacg
attcgccccgacaacatcggcgtgatcaccatcgacgtgccgggcgataaggtcaatacg
ctcaaggccgagttcgtcgaacaggtgaacgacgtgctgatccgggcgcagcagcatacc
gcgctggaaggattggtgatcgtttccggcaagccggactcgtttatcgccggcgccgac
atcaccatgattgccgcctgcaccagcgccaaagaggcggaaacgctggccaagaaaggg
cagagcacgctagcgcagatcgccgccttcccggtgccggtggtggccgccattcatggc
gcctgcctgggcggcggcctggaattggcgctggcctgccacggccgcgtctgttcgttg
gatgacaaaaccgcgctcggtctgccggaagtgcaactgggcctgctgccgggctccggc
ggcactcagcgcctgccgcgcttggttggcgccgccaaggcgctggacatgatcctgacc
ggcaagcacattcgcgcccgccaggcgctgcgcatggggctggtggacgacgccgtgccg
cagtcgatcctgttgcagaccgccatcgagcgggtgaaacagggctggaagcatcagcgc
gagctgccgtggcaggatcgcctgctcaatggcccgctgggcagaaatctgctgttcagc
attgtgcgcaaaaaaacgttggcgaaaacccacggcaactacccggcggcggaacgcatc
attcaggtagtgcgcaccgggctggatcacggcagcgccagcggctatgaagccgaagcg
cgcgcctttggcgaactggcgatgacgccgcagtcggcggcgctgcgcagcctgttcttc
gcctccactgcgctgaaaaaagagcggggcggcaatgccaagccgcatgccctgcatcgc
gtcggcattctcggcggcggcctgatgggcggcggcatcgcctgcgtcaccgccacgcgc
ggcggtttgccggttcgtatcaaagacattaatgaaaccggcatcaatcacgcgctgaaa
tacagctgggacgtgcttggcaaacgggtacgcagcaagcgcatgcgcccggcggaacgg
caaaaacagatgatgctgatctccggctctaccgattacaccggctttgagcaggtggat
atcgtggtcgaggcggtgtttgaggatctggcgctgaagcagaagatggtggccgaggtc
gaagcgaactgtgcgccgcataccgtgtttgcctccaatacttcctcgttgcctatcggc
cacatcgccgaaaaagcccagcggccgcagcaggtgatcggtctgcactactttagcccg
gtggacaaaatgccgctggtggaagtgatcccgcacgccggcaccagcgaagagactatc
gcgaccaccgtggcgctggcgcacaagcagggcaagaccgctatcgtggtgggcgacagc
gcgggtttttatgtcaaccgcatcctggcgccgtacatcaacgaagcggcccgttgcctg
ctggaaggcgagccgatggagtcgctggacaaggcgctggtggacttcggtttcccggtc
ggcccgatcaccctgttggacgaagtgggcatcgacgtcggcaccaagatcattccggtg
ctggtcgaggcgctggggccgcgcttcgccgcgccggctgcgttcgatgcggtgctgaag
gacgggcgtaaagggcgcaagaacggccgcggcttctatctttacccgagcgaagggcag
cagcggcagcggcgtaaacgtgcggatacctcattgtatacgttgctcggcgtcacgccg
aaggcgcacatgctgccggcgaccgtcgcccagcgctgcgtgatgatgatgctgaacgaa
gcggcgcgctgcctggatgaaggcgtgatccgcagcgcgcgcgacggcgacatcggcgcg
gtgttcggcatcggcttcccgccgttcctcggcggcccgttccgctatatggacgagctc
ggcgccgaaaaagtggtgaaaacgttggaatacctgcgccagcagcacggcgagcacttc
gcgccgtgcgaacgcttgcagcgcatggcgcagcagggcgagcgtttttacccgctgggg
agctga
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